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. 2011 May 13;39(15):6789–6801. doi: 10.1093/nar/gkr275

Table 1.

Standard thermodynamic profiles for the formation of DNA duplexes at 20°Ca

ODN NaCl TM ΔHcal ΔG°20 TΔScal ΔnNa+ Δnw
(mM) (°C) (kcal/mol) (kcal/mol) (kcal/mol) (mol−1 DNA) (/mol DNA)
1 10 29.5 −80.1 −5.6 −74.5 −2.2 ± 0.2 −30 ± 4
100 53.0 −72.3 −8.2 −64.1 −1.7 ± 0.1 −22 ± 3
2 10 23.2 −44.4 −2.3 −42.1 −1.7 ± 0.1 −15 ± 1
100 39.2 −33.2 −3.0 −30.1 −1.2 ± 0.1 −10 ± 1
3 10 41.0 −78.2 −6.9 −71.3 −3.4 ± 0.2 −41 ± 3
100 59.5 −92.0 −12.5 −79.5 −3.6 ± 0.2 −43 ± 4
4 10 39.4 −39.3 −3.2 −36.1 −1.0 ± 0.1 −14 ± 2
100 51.2 −39.5 −4.6 −35.0 −0.9 ± 0.1 −13 ± 2
5 10 68.4 −31.0 −4.4 −26.6 −0.3 ± 0.1 −18 ± 2
100 69.9 −27.7 −4.1 −23.6 −0.2 ± 0.1 −16 ± 1
6 10 56.5 −16.6 −1.8 −14.8 −0.3 ± 0.1 −7 ± 1
100 61.0 −7.8 −1.0 −6.9 −0.1 ± 0.1 −3 ± 1

aAll parameters are measured from UV (TM) and DSC melting curves in 10 mM sodium phosphate buffer (pH 7.0) using ∼10 µM DNA. The observed standard deviations are: TM (±0.7), ΔHcal (±3), ΔG°20 (±0.15), TΔScal (±2).