Table III.
Gene# | Definition | Function | Fold change T48 vs T0 | miRNAs |
---|---|---|---|---|
XPO5 | Exportin-5 | Mediates the nuclear export of microRNA precursors. | 4.30 | miR-218 miR-24 |
RANGAP1 | Ran GTPase-activating protein 1 | mRNA processing and transport | 1.60 | ND |
EIF2C2/AGO2 | Protein argonaute-2 | Provides endonuclease activity to RNA- induced silencing complexes (RISC). Cleaves siRNA/mRNA heteroduplexes bound to RISC. | 3.84 | ND |
SIP1/GEMIN2 | Survival of motor neuron protein- interacting protein 1 | Core component of the survival of motor neuron (SMN) complex, which plays an essential role in spliceosomal snRNP assembly in the cytoplasm and is required for pre-mRNA splicing in the nucleus. | 2.23 | ND |
GEMIN4 | Gem-associated protein 4 | Component of the SMN complex, which is required for pre-mRNA splicing in the nucleus. | 1.59 | miR-155 |
GEMIN5 | Gem-associated protein 5 | Component of the SMN complex, which is required for pre-mRNA splicing in the nucleus. | 2.13 | ND |
GEMIN6 | Gem-associated protein 6 | Component of the SMN complex, which is required for pre-mRNA splicing in the nucleus. | 2.11 | ND |
GEMIN7 | Gem-associated protein 7 | Component of the SMN complex, which is required for pre-mRNA splicing in the nucleus. | 1.90 | ND |
YBX1 | Nuclease-sensitive element-binding protein 1 | Participates in different steps of mRNA biogenesis, including mRNA transcription, processing, and transport from the nucleus into the cytoplasm, binds to splice sites in pre-mRNA, and regulates splice site selection. | 1.53 | ND |
ADARB1 | Double-stranded RNA- specific editase 1 | Binds to short interfering RNAs (siRNA) without editing them and suppresses siRNA-mediated RNA interference. | 1.50 | miR-218 |
The FDR adjusted p values of every gene in this table is <0.007. Shown are genes implicated in miRNA processing/biogenesis that were significantly differentially expressed between 0 and 48 hours, with relative fold changes.
ND = miRNA not detected