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. 2011 Aug 23;5(8):e1281. doi: 10.1371/journal.pntd.0001281

Table 4. Analysis of molecular variance (AMOVA) from haplotypic frequencies for Sodalis glossinidius microsatellite data.

Source of variation d. f. Variance components Percentage of variation Fixation indices / P-value
Among groups 1 0.009 1.93 0.019 (FCT)/0.252
Among populations within groups 2 0.001 0.29 0.003 (FSC)/0.333
Among all populations 240 0.432 97.78 0.022 (FST)/0.006

Groups correspond to the two HAT foci, Bipindi (S. glossinidius population in Ebimimbang) and Campo (Campo Beach (CB)/Ipono, Akak, and Mabiogo populations). The three fixation indices are: FCT, which can be interpreted as the relative divergence between HAT foci, FSC, corresponding to the relative divergence between populations within the Campo focus, and FST, corresponding to the relative divergence between populations.