Table 1.
Species | Protein name | Type | Accession number | Database | No. aa+ |
---|---|---|---|---|---|
DICOTS | |||||
Aquilegia coerulea | AcoTRZ1 | TM-type tRNase ZS | AcoGoldSmith_v1.019418 m.g | Phytozome | 283 |
Aquilegia coerulea | AcoTRZ2 | TM-type tRNase ZS | AcoGoldSmith_v1.007495 m.g | Phytozome | 356 |
Aquilegia coerulea | AcoTRZ3 | tRNase ZL | AcoGoldSmith_v1.000749 m.g | Phytozome | 997* |
Aquilegia coerulea | AcoTRZ4 | tRNase ZL | AcoGoldSmith_v1.024294 m.g | Phytozome | 848* |
Arabidopsis thaliana | AthTRZ1 | TM-type tRNase ZS | NP_177608.2 | NCBI | 280 |
Arabidopsis thaliana | AthTRZ2 | TM-type tRNase ZS | NP_178532.2 | NCBI | 354 |
Arabidopsis thaliana | AthTRZ3 | tRNase ZL | NP_175628.2 | NCBI | 890 |
Arabidopsis thaliana | AthTRZ4 | tRNase ZL | NP_188247.2 | NCBI | 942 |
Carica papaya | CpaTRZ1 | TM-type tRNase ZS | evm.TU.supercontig_17.217 | Phytozome | 306 |
Carica papaya | CpaTRZ2 | TM-type tRNase ZS | evm.TU.supercontig_132.51 | Phytozome | 359* |
Carica papaya | CpaTRZ3 | tRNase ZL | evm.TU.supercontig_34.31 | Phytozome | 943* |
Citrus clementina | CclTRZ1 | TM-type tRNase ZS | clementine0.9_017657 m.g | Phytozome | 288 |
Citrus clementina | CclTRZ2 | TM-type tRNase ZS | clementine0.9_014182 m.g | Phytozome | 355 |
Citrus clementina | CclTRZ3 | tRNase ZL | clementine0.9_001700 m.g | Phytozome | 938 |
Cucumis sativus | CsaTRZ1 | TM-type tRNase ZS | Cucsa.369470 | Phytozome | 301* |
Cucumis sativus | CsaTRZ2 | TM-type tRNase ZS | Cucsa.185180 | Phytozome | 347 |
Cucumis sativus | CsaTRZ3 | tRNase ZL | Cucsa.359360 | Phytozome | 977 |
Eucalyptus grandis | EgrTRZ1 | TM-type tRNase ZS | Egrandis_v1_0.020509 m.g | Phytozome | 309 |
Eucalyptus grandis | EgrTRZ2 | TM-type tRNase ZS | Egrandis_v1_0.021229 m.g | Phytozome | 357* |
Eucalyptus grandis | EgrTRZ3 | tRNase ZL | Egrandis_v1_0.001658 m.g | Phytozome | 971 |
Glycine max | GmaTRZ1 | TM-type tRNase ZS | Glyma20g01480 | Phytozome | 279 |
Glycine max | GmaTRZ2 | TM-type tRNase ZS | ACU18735.1 | NCBI | 353 |
Glycine max | GmaTRZ3 | tRNase ZL | Glyma13g43270 | Phytozome | 923* |
Glycine max | GmaTRZ4 | tRNase ZL | Glyma15g02070 | Phytozome | 931* |
Mimulus guttatus | MguTRZ1 | TM-type tRNase ZS | mgv1a010642 m.g | Phytozome | 306 |
Mimulus guttatus | MguTRZ2 | TM-type tRNase ZS | mgv1a024577 m.g | Phytozome | 364* |
Mimulus guttatus | MguTRZ3 | tRNase ZL | mgv1a000815 m.g | Phytozome | 976 |
Vitis vinifera | VviTRZ1 | TM-type tRNase Z S | XP_002273058.1 | NCBI | 290 |
Vitis vinifera | VviTRZ2 | TM-type tRNase Z S | XP_002277241.1 | NCBI | 354 |
Vitis vinifera | VviTRZ3 | tRNase ZL | XP_002278956.1 | NCBI | 951 |
MONOCOTS | |||||
Oryza sativa japonica | OsaTRZ1 | TM-type tRNase ZS | NP_001046280.1 | NCBI | 302 |
Oryza sativa japonica | OsaTRZ2 | TM-type tRNase ZS | LOC_Os09g30466 | Phytozome | 365 |
Oryza sativa japonica | OsaTRZ3 | tRNase ZL | B9EUI7 | UniProt | 964 |
Zea mays | ZmaTRZ1 | TM-type tRNase ZS | GRMZM2G147727 | Phytozome | 302 |
Zea mays | ZmaTRZ2 | TM-type tRNase ZS | ACG47847.1 | NCBI | 357 |
Zea mays | ZmaTRZ3 | tRNase ZL | GRMZM2G379286 | Phytozome | 930 |
MOSSES | |||||
Physcomitrella patens | PpaTRZ1 | TM-type tRNase ZS | XP_001785449.1 | NCBI | 295 |
Physcomitrella patens | PpaTRZ2 | TM-type tRNase ZS | Pp1s17_61V6 | Phytozome | 420 |
Physcomitrella patens | PpaTRZ3 | Bacterial-type tRNase ZS | Pp1s409_46V6 | Phytozome | 336* |
Physcomitrella patens | PpaTRZ4 | tRNase ZL | Pp1s126_39V6 | Phytozome | 984* |
Physcomitrella patens | PpaTLP1 | tRNase ZL-like | Pp1s3_568V6 | Phytozome | 923* |
LYCOPHYTES | |||||
Selaginella moellendorffii | SmoTRZ1 | TM-type tRNase ZS | 167717 | Phytozome | 299 |
Selaginella moellendorffii | SmoTRZ2 | tRNase ZL | 111409 | Phytozome | 771* |
Selaginella moellendorffii | SmoTRZ3 | tRNase ZL | 97243 | Phytozome | 819* |
Selaginella moellendorffii | SmoTLP1 | tRNase ZS-like | 404484 | Phytozome | 303 |
Selaginella moellendorffii | SmoTLP2 | tRNase-like | XP_002967989 | NCBI | 346 |
Selaginella moellendorffii | SmoTLP3 | tRNase ZL-like | 416540 | Phytozome | 731 |
GREEN ALGAE | |||||
Chlamydomonas reinhardtii | CreTRZ1 | TM-type tRNase ZS | Cre10.g431400 | Phytozome | 335 |
Chlamydomonas reinhardtii | CreTRZ2 | tRNase ZL | Cre01.g039900 | Phytozome | 880* |
Chlamydomonas reinhardtii | CreTLP1 | tRNase ZS-like | Cre12.g492250 | Phytozome | 425* |
Chlamydomonas reinhardtii | CreTLP2 | tRNase ZS -like | Cre07.g321900 | Phytozome | 378 |
Chlamydomonas reinhardtii | CreTLP3 | tRNase ZL-like | Cre01.g068350 | Phytozome | 710* |
Chlamydomonas reinhardtii | CreTLP4 | tRNase ZL-like | Cre09.g394700 | Phytozome | 1073 |
Micromonas pusilla | MpuTRZ1 | TM-type tRNase ZS | 5692 | JGI | 383* |
Micromonas pusilla | MpuTRZ2 | Bacterial-type tRNase ZS | 18700 | JGI | 398* |
Micromonas pusilla | MpuTRZ3 | tRNase ZL | 54013 | JGI | 953* |
Micromonas pusilla | MpuTLP1 | tRNase ZL-like | C1N4P0 | UniProt | 866 |
Ostreococcus lucimarinus | OluTRZ1 | TM-type tRNase ZS | 26345 | JGI | 313 |
Ostreococcus lucimarinus | OluTRZ2 | Bacterial-type tRNase ZS | XP_001416263 | NCBI | 369* |
Ostreococcus lucimarinus | OluTRZ3 | tRNase ZL | A4S9E8 | UniProt | 781* |
Ostreococcus lucimarinus | OluTLP1 | tRNase ZL-like | A4RR41 | UniProt | 780 |
Volvox carteri | VcaTRZ1 | TM-type tRNase Z S | 80918 | Phytozome | 308* |
Volvox carteri | VcaTRZ2 | tRNase ZL | 118548 | Phytozome | 881* |
Volvox carteri | VcaTLP1 | tRNase ZS-like | 103834 | Phytozome | 445* |
Volvox carteri | VcaTLP2 | tRNase ZL-like | 100314 | Phytozome | 723* |
+The number of amino acids in plant tRNase Z and tRNase Z-like proteins.
*Indicates that mispredicted sequences obtained from the databases have been corrected.