Table 5.
Statistics of miRNA target sites within different types of alternatively spliced exons between two different data sources.
| Data source | |||
|---|---|---|---|
| ASTD | UniGene | ||
| *MFE | < = -12 kcal/mol | ||
| *Score | > 120 | ||
| **AS | cassette exon | 11.98% | 52.70% |
| alternative 5' SS. | 0.76% | 6.80% | |
| alternative 3' SS | 0.99% | 7.55% | |
| mutually exclusive | 0.92% | 0.19% | |
| intron retention | 3.92% | 1.26% | |
| CS (Constitutively spliced exon) | 81.43% | 31.50% | |
*miRNA target prediction parameters: MFE (Minimum Free Energy of duplex); Score (alignment score of duplex).
**AS: alternatively spliced exon.