Table 2.
G8-Specific Regions | C58 CDSs | Region Occurrence Outside G8 | Main Predicted Functions | Experimental Validationa |
SpG8-1a | Atu1398–Atu1408 | G6-NCCPB 925 | Sugar and amino acid transport; sugar metabolism | Not done |
SpG8-1b | Atu1409–Atu1423 | G9-Hayward 0362 | Ferulic acid uptake and catabolism | Present work |
SpG8-2a | Atu3054–Atu3059 | r | Curdlan EPS biosynthesis | Present work |
SpG8-2b | Atu3069–Atu3073 | r | Secondary metabolite biosynthesis | Not done |
SpG8-3 | Atu3663–Atu3691 | G1-ICPPB TT111 | Siderophore biosynthesis; iron-siderophore uptake | Rondon et al. (2004) |
G6-NCCPB 925 | ||||
SpG8-4 | Atu3808–Atu3830 | G6-NCCPB 925 | Ribose transport; monosaccharide catabolism and carbohydrate metabolism | Not done |
SpG8-5 | Atu3947–Atu3952 | r | Opine-like compounds catabolism | Not done |
SpG8-6a | Atu4196–Atu4206 | G1-CFBP 5771 | Drug/toxic (tetracycline) resistance | Luo and Farrand (1999) |
SpG8-6b | Atu4213–Atu4221 | r | Drug/toxic resistance | Not done |
SpG8-7a | Atu4285–Atu4294 | G6-NCCPB 925 | Environmental signal sensing/transduction | Not done |
SpG8-7b | Atu4295–Atu4307 | Not present outside G8 | Environmental signal sensing/transduction | Not done |
NOTE.—r, rare occurrence of some CDSs outside G8.
Deleted mutants of C58 were obtained for all regions.