Table 1.
List of most highly induced genes upon L-cysteine deprivation
| Probe set ID | Accession numbers | Common Names | Basal Expression (log2) | 3 h | 6 h | 12 h | 24 h | 48 h | p value |
|---|---|---|---|---|---|---|---|---|---|
| EHI_173950_at | XM_647419 | Major facilitator superfamily (MFS) transporter | 6.11 | + 4.1 | + 14.6 | + 10.0 | + 4.7 | + 2.6 | 3.0E-07 |
| EHI_138480_at | XM_650038 | Iron-sulfur flavoprotein, putative | 8.40 | + 3.6 | + 6.8 | + 9.8 | + 5.4 | + 4.2 | 4.5E-08 |
| EHI_025710_at | XM_644279 | Iron-sulfur flavoprotein, putative | 7.17 | + 3.6 | + 5.4 | + 8.7 | + 5.2 | + 3.9 | 1.0E-06 |
| 13.m00350_at | XM_651312 | Hypothetical protein | 2.73 | - 1.0 | + 2.4 | + 7.8 | + 5.4 | + 6.5 | 2.4E-04 |
| EHI_176810_at | XM_644746 | Hypothetical protein | 3.53 | + 4.8 | + 8.8 | + 6.0 | + 1.2 | - 1.3 | 4.6E-04 |
| EHI_130490_at | XM_643338 | Hypothetical protein | 7.42 | + 1.7 | + 1.9 | + 5.8 | + 3.5 | + 1.7 | 1.8E-05 |
| EHI_091050_at | XM_645468 | Zinc finger protein, putative (IBR superfamily) | 5.39 | + 2.9 | + 9.1 | + 5.7 | - 1.4 | - 1.7 | 1.3E-06 |
| EHI_080280_at | XM_644430 | Glu6-phosphate N-acetyltransferase. putative | 3.79 | + 8.6 | + 6.2 | + 5.5 | + 1.3 | - 1.3 | 3.3E-05 |
| EHI_032670_s_at | XM_645799 | Iron sulfur flavoprotein like, putative | 7.47 | + 1.5 | + 3.5 | + 5.4 | + 3.9 | + 4.0 | 3.4E-06 |
| 870.m00013_x_at | XM_642792 | Hypothetical protein | 2.54 | + 3.4 | + 6.4 | + 5.0 | + 1.3 | + 1.9 | 6.5E-04 |
| EHI_096770_at | XM_650580 | Acetyltransferase, putative | 7.01 | + 1.9 | + 3.4 | + 4.8 | + 3.7 | + 4.2 | 4.9E-05 |
| EHI_137260_at | XM_647486 | Hypothetical protein | 2.97 | + 3.7 | + 4.4 | + 4.8 | + 2.4 | + 2.6 | 2.0E-03 |
| 65.m00145_x_at | XM_648920 | Hypothetical protein | 3.08 | + 1.2 | + 3.3 | + 4.7 | + 1.1 | - 1.6 | 6.1E-06 |
| EHI_062300_at | XM_645096 | Hypothetical protein | 4.10 | + 1.7 | + 1.9 | + 4.7 | + 2.7 | + 2.1 | 1.7E-03 |
| 337.m00049_x_at | XM_644075 | Hypothetical protein | 2.48 | + 2.9 | + 5.2 | + 4.5 | + 1.7 | + 1.0 | 1.5E-03 |
| EHI_148740_at | XM_001913345 | Hypothetical protein | 8.19 | + 1.9 | + 2.7 | + 4.4 | + 1.7 | + 1.3 | 1.0E-06 |
| 79.m00141_x_at | XM_648476 | Hypothetical protein | 2.90 | + 2.0 | + 3.1 | + 4.4 | + 1.7 | + 1.2 | 2.4E-02 |
| EHI_189190_x_at | XM_644225 | Hypothetical protein | 3.25 | + 1.7 | + 4.8 | + 4.4 | - 1.0 | - 1.9 | 4.3E-05 |
| EHI_039720_at | XM_642957 | Hypothetical protein | 2.53 | - 1.0 | + 2.1 | + 4.4 | + 3.3 | + 1.4 | 1.6E-05 |
| EHI_051040_s_at | XM_647890 | Hypothetical protein | 6.82 | + 1.5 | + 2.7 | + 4.4 | + 2.5 | + 2.8 | 1.9E-03 |
| EHI_139080_at | XM_643428 | Longevity-assurance family protein | 5.38 | - 2.3 | + 1.2 | + 4.4 | + 2.3 | + 2.0 | 4.4E-06 |
| EHI_067230_x_at | XM_647567 | Hypothetical protein | 6.18 | + 9.7 | + 13.6 | + 4.2 | - 1.3 | - 1.1 | 1.4E-07 |
| EHI_055680_at | XM_646949 | Heat shock protein, Hsp20 family, putative | 5.63 | + 2.0 | + 4.6 | + 4.2 | + 1.6 | + 1.2 | 1.4E-03 |
| EHI_086500_s_at | XM_646060 | Short chain dehydrogenase | 4.86 | + 6.1 | + 8.1 | + 4.2 | + 1.1 | - 1.4 | 1.2E-04 |
| EHI_148970_s_at | XM_652477 | Regulator of nonsense transcripts, putative | 9.86 | + 5.9 | - 1.0 | - 4.1 | - 5.1 | - 9.7 | 1.5E-07 |
| EHI_139090_at | XM_643429 | Hypothetical protein | 5.95 | + 1.6 | + 1.9 | + 4.1 | + 1.3 | - 1.5 | 6.2E-05 |
| 167.m00129_at | XM_646319 | Hypothetical protein | 3.36 | + 2.4 | + 4.8 | + 4.0 | + 2.0 | + 1.9 | 1.6E-03 |
| EHI_110840_s_at | XM_649191 | Regulator of nonsense transcripts, putative | 9.73 | + 6.5 | + 1.0 | - 4.0 | - 4.6 | - 8.7 | 1.2E-07 |
| EHI_178130_at | XM_646412 | Hypothetical protein | 5.09 | + 2.0 | + 3.2 | + 4.0 | + 2.4 | + 2.8 | 5.9E-05 |
| EHI_110370_at | XM_651955 | Hypothetical protein | 4.52 | - 1.3 | + 1.3 | + 3.9 | + 2.6 | + 4.1 | 2.0E-04 |
| EHI_070810_x_at | XM_649317 | Regulator of nonsense transcripts, putative | 4.76 | + 7.4 | - 1.1 | - 3.9 | - 4.3 | - 4.8 | 1.6E-05 |
| EHI_004990_at | XM_647768 | Ankyrin, putative | 6.30 | + 2.0 | + 4.3 | + 3.8 | + 2.4 | + 3.0 | 5.1E-05 |
| EHI_023330_at | XM_650547 | Hypothetical protein | 9.16 | + 6.5 | + 1.4 | - 3.6 | - 7.1 | - 8.3 | 8.2E-07 |
| EHI_005160_s_at | XM_647757 | Hypothetical protein | 2.94 | + 2.9 | + 4.5 | + 3.4 | + 1.6 | + 1.2 | 6.7E-03 |
| EHI_028940_at | XM_647571 | Hypothetical protein | 8.44 | + 6.1 | + 6.5 | + 3.4 | - 1.0 | - 1.2 | 1.4E-07 |
| EHI_033240_x_at | XM_645809 | Riboflavin kinase/FAD synthetase, putative | 6.61 | + 1.4 | + 4.6 | + 3.4 | + 3.0 | + 2.6 | 8.6E-07 |
| 493.m00030_x_at | XM_643175 | Hypothetical protein | 8.73 | + 3.9 | + 5.2 | + 3.3 | - 1.8 | - 1.9 | 1.4E-07 |
| 15.m00356_at | XM_651173 | Hypothetical protein | 7.03 | + 3.4 | + 4.2 | + 3.3 | + 1.7 | + 2.1 | 1.8E-03 |
| EHI_110480_at | XM_651901 | Hypothetical protein | 4.51 | + 2.3 | + 4.2 | + 3.3 | + 2.9 | + 1.7 | 1.5E-04 |
| EHI_140620_x_at | XM_645555 | Hypothetical protein | 2.32 | + 2.1 | + 5.9 | + 3.2 | + 1.3 | + 1.2 | 2.3E-02 |
| EHI_136430_at | XM_650171 | Hypothetical protein | 4.08 | + 7.5 | + 7.8 | + 3.2 | - 2.3 | + 1.0 | 4.1E-06 |
| 373.m00052_s_at | XM_643804 | Hypothetical protein | 6.53 | + 4.1 | + 2.0 | + 3.1 | + 1.0 | - 1.1 | 7.9E-04 |
| EHI_141030_at | XM_649510 | DNA methyltransferase, putative | 5.97 | + 2.4 | + 1.7 | + 2.3 | + 3.9 | + 4.1 | 3.6E-05 |
| EHI_178520_at | XM_647939 | Regulator of nonsense transcripts, putative | 6.30 | + 6.2 | - 1.4 | - 2.1 | - 1.9 | - 1.4 | 8.7E-06 |
| EHI_142270_at | XM_648119 | Hypothetical protein | 8.27 | + 3.7 | + 4.1 | + 2.0 | - 1.0 | - 1.1 | 2.9E-04 |
| EHI_014340_at | XM_649988 | Hypothetical protein | 6.45 | + 2.7 | + 5.2 | + 1.9 | + 1.1 | - 1.1 | 4.9E-05 |
| EHI_064440_at | XM_648922 | Hypothetical protein | 5.03 | - 1.5 | - 1.2 | + 1.7 | + 2.5 | + 4.0 | 2.0E-03 |
| EHI_120930_s_at | XM_649257 | Protein kinase domain containing protein | 2.61 | + 6.8 | - 1.0 | + 1.5 | + 2.3 | + 1.8 | 2.4E-03 |
| 637.m00013_s_at | XM_642916 | Regulator of nonsense transcripts, putative | 2.92 | + 6.6 | - 1.2 | - 1.5 | - 1.5 | - 1.1 | 3.6E-05 |
| EHI_031640_at | XM_648447 | Hypothetical protein | 6.98 | + 2.3 | - 3.1 | + 1.5 | + 3.6 | + 5.8 | 1.8E-06 |
| EHI_103640_at | XM_643960 | Protein kinase domain containing protein | 3.10 | + 5.2 | - 1.0 | - 1.4 | + 1.4 | + 1.2 | 5.6E-04 |
| EHI_014910_s_at | XM_001914428 | Hypothetical protein | 2.99 | + 6.0 | + 1.5 | - 1.3 | + 1.4 | - 1.2 | 2.7E-04 |
| EHI_038910_at | XM_651787 | Hypothetical protein | 2.57 | + 5.3 | + 2.3 | + 1.2 | + 1.6 | - 1.0 | 5.1E-03 |
| EHI_190460_at | XM_646352 | Amino acid transporter, putative | 3.11 | - 1.2 | - 1.4 | + 1.2 | + 2.2 | + 3.9 | 2.9E-03 |
| EHI_084710_at | XM_650002 | Hypothetical protein | 4.27 | + 5.3 | + 2.3 | + 1.1 | + 2.2 | + 1.2 | 5.1E-04 |
| EHI_054680_at | XM_646972 | Hypothetical protein | 3.09 | - 1.2 | - 1.4 | - 1.1 | + 2.7 | + 5.9 | 4.8E-04 |
| 50.m00196_s_at | XM_649450 | Hypothetical protein | 4.95 | + 4.2 | - 1.5 | - 1.1 | + 1.2 | - 1.4 | 9.0E-05 |
| EHI_046040_s_at | XM_645992 | Hypothetical protein | 5.08 | + 6.5 | + 1.5 | - 1.1 | - 1.0 | - 1.6 | 1.1E-05 |
The probe set IDs, accession numbers, common names, basal expressions, fold changes, and p values of most highly induced genes upon L-cysteine deprivation are shown.