Table 3. Summary of the non-parametric linkage results for diabetic nephropathy on the regions showing significant or suggestive evidence of linkage.
Non-parametric two-point | Non-parametric multipoint | ||||||
Chr | cM | Markera | ASP LOD | All-ASP LOD | NPLpair LOD | NPLqtl LOD | |
Finnish | 5p15 | 36.73 | D5S416 | 0.13 | 0.95 | 0.18 | 1.94 |
5p14 | 46.2 | D5S419 | 0.07 | 1.20 | 0.20 | 2.06 | |
6p21 | 47.9 | D6S276 | 2.31 | 0.43 | 2.10 | 0.24 | |
15q15.1 | 42.62 | D15S994 | 0.08 | 1.28 | 0.42 | 1.74 | |
16p12 | 49.5 | D16S3068 | 1.82 | 0.28 | 2.09 | 0.28 | |
17q25.3 | 129.62 | D17S784 | 0.22 | 2.04 | 0.34 | 1.35 | |
22q11 | 2.96 | D22S420 | 2.09 | 0.07 | 1.30 | 0.32 | |
Danish | 22q11 | 2.96 | D22S420 | 0.66 | 0.59 | 1.35 | 1.15 |
French | 6p23 | 34.61 | D6S289 | 1.36 | 2.61 | 1.18 | 1.20 |
9p21.2 | 51.5 | D9S161 | 0.83 | 1.94 | 1.15 | 2.19 | |
22q11 | 2.96 | D22S420 | 0.33 | 0.00 | 0.97 | 0.01 | |
Joint | 6p23–p22.3 | 34.61 | D6S289 | 1.79 | 2.41 | 1.95 | 1.49 |
6p22.3 | 42.83 | D6S422 | 1.06 | 0.27 | 2.04 | 0.27 | |
6p21 | 47.93 | D6S276 | 2.82 | 0.37 | 2.35 | 0.04 | |
7q21.11 | 162.09 | D7S669 | 0.14 | 1.92 | 0.23 | 0.75 | |
22q11 | 2.96 | D22S420 | 2.78 | 0.31 | 3.58 | 0.86 | |
Joint including finemapping markers | 22q11 | 2.96 | D22S420 | 2.78 | 0.31 | 2.19 | 0.60 |
22q11.21 | 5.8 | D22S427a | 0.51 | 0.12 | 1.69 | 0.82 | |
22q11.21–q22 | 14.68 | D22S539 | 0.47 | 0.82 | 1.43 | 1.49 | |
22q11.23 | 18.8 | D22S1174a | 1.49 | 1.13 | 1.28 | 1.20 | |
22q11.23–q12.1 | 22.59 | D22S315 | 0.07 | 0.6 | 0.86 | 1.37 | |
22q12.1 | 24.38 | D22S1154a | 0.15 | 0.64 | 1.09 | 1.33 | |
22q12.1 | 30.54 | D22S1163a | 0.71 | 0.74 | 0.84 | 0.52 |
Chr = chromosome; cM = centiMorgan; ASP = two-point affected sib-pair LOD score; NPL = multi-point non-parametric LOD score based on Merlin sib-pair analysis; NPLqt l = multi-point non-parametric LOD score based on Merlin qtl-analysis;
additional markers genotyped on chromosome 22q.
Results on D22S420 are shown in each population and results after mapping four additional markers on chromosome 22q11–q12 in the joint sample set.