Table 2. The comparison of top 10 level-2 genes selected by GMI and TBM in the SRBCT data set.
Probes | GMI Mean Order | GMI Rank | GMI Freq. | TBM Rank | TBM Template | TBM Freq. | LOOCV NNC Acc. |
774502 | (34)(12) | 1 | 95 | 1 | (34)(12) | 83 | 0.8413 |
365826 | (14)(32) | 2 | 75 | 33 | (14)(23) | 7 | 0.9048 |
784593 | (34)(12) | 3 | 72 | 19 | (34)(12) | 16 | 0.7778 |
812965 | (21)(43) | 4 | 64 | 4 | (12)(34) | 65 | 0.7143 |
789182 | (23)(41) | 5 | 54 | 5 | (23)(14) | 50 | 0.8730 |
859359 | (43)(12) | 6 | 44 | 13 | (34)(12) | 25 | 0.8889 |
714453 | (42)(13) | 7 | 38 | 8 | (24)(13) | 40 | 0.7460 |
82903 | (21)(43) | 8 | 37 | 32 | (12)(34) | 7 | 0.7460 |
159455 | (41)(32) | 9 | 34 | 22 | (14)(23) | 12 | 0.8254 |
308163 | (41)(32) | 10 | 32 | 24 | (14)(23) | 11 | 0.7302 |
841620 | (13)(42) | 12 | 27 | 2 | (13)(24) | 77 | 0.6508 |
789204 | (23)(41) | 16 | 21 | 3 | (23)(14) | 71 | 0.7460 |
841641 | (13)(42) | 11 | 28 | 6 | (13)(24) | 47 | 0.7778 |
809557 | (23)(14) | 18 | 17 | 7 | (23)(14) | 40 | 0.7460 |
782811 | (23)(14) | 33 | 6 | 9 | (23)(14) | 36 | 0.6984 |
47542 | (23)(41) | 15 | 22 | 10 | (23)(14) | 35 | 0.7460 |
TBM: Template-based method.
Ewing sarcomas (EWS), Burkitt lymphomas (BL), neuroblastomas (NB), and rhabdomyosarcomas (RMS) are represented as Group 1 to Group 4 in order.