Table 1.
Targeta | Primerb | Sequencec |
---|---|---|
RT qPCR | ||
infB | infBf | 5′-TCAGAGCTGGCCACCATGA-3′ |
infBr | 5′-CAGCATCCAGACGCTGGTT-3′ | |
atpD | atpDf | 5′-TGGGTATCTATCCCGCTGTTG-3′ |
atpDr | 5′-TTGACACGCTGGGCACAAT-3′ | |
rpoB | rpoBf | 5′-GAAGACCTTGCTGAGTGGACTGA-3′ |
rpoBr | 5′-TAGCAGGCTGGTCGAAACG-3′ | |
PRU_0012 | 12f | 5′-TACTGCTATTACTCGCCATCAT-3′ |
12r | 5′-ATCCATAAATGCACGGCA-3′ | |
PRU_1101 | 1101f | 5′-ACTGATTTTTGCACTGGTGATT-3′ |
1101r | 5′-AGTTTGCCCGATTGTTTAT-3′ | |
PRU_1396 | 1396f | 5′-ACTAATTGTAGTGCTGGTGAGT-3′ |
1396r | 5′-TGGCAAAACGTGTAACGTA-3′ | |
PRU_1726 | 1726f | 5′-GACTGGATGTGACTGCCCAT-3′ |
1726r | 5′-GGCAGCAAACGCTTGGTA-3′ | |
PRU_2033 | 2033f | 5′-TGGTTCGCGCTCAGATTT-3′ |
2033r | 5′-CCGTTAGCATCCTTCTTCAT-3′ | |
PRU_2212 | 2212f | 5′-CTGATGCTGGCTATGACCAT-3′ |
2212r | 5′-AACAATGGCTCTGCCTGA-3′ | |
PRU_2584 | 2584f | 5′-AAGCCGAACTTTAGGTAAGA-3′ |
2584r | 5′-TTCTGTCTGCAACGGTTT-3′ | |
PRU_2630 | 2630f | 5′-TCCTATTATCAGCAGCATTGCT-3′ |
2630r | 5′-CGGGCAGATAAACAGTTAGTT-3′ | |
PRU_2678 | 2678f | 5′-TGTTTAACTTTGCACCCAAA-3′ |
2678r | 5′-CCACAAATAATCAGCACGATA-3′ | |
PRU_2707 | 2707f | 5′-CTACCGAACAGGTTGGCAA-3′ |
2707r | 5′-ATCAGGAGGAAGCGTGGA-3′ | |
PRU_2728 | 2728f | 5′-ACGTCCTGTAGATTATGCAGCA-3′ |
2728r | 5′-GCAGGATCAGAGATGTTGAA-3′ | |
Heterologous | ||
PRU_2212 | 2212_HEf | 5′-catatgCAGACCGCAAAGAAGTTTACGTTGAACCTGTC-3′ |
2212_HEr | 5′-ctcgagTTATTTGATGGCAGCCGCAATGATCTCGGCC-3′ | |
PRU_2678 | 2678_HEf | 5′-catatgGAGAATTATCCCTATCGTGCTGATTATTTG-3′ |
2678_HEr | 5′-ctcgagTTATTTTACTTGTTTTTTGAGCCATAGC-3′ | |
PRU_2707 | 2707_HEf | 5′-gacgacgacaagatgGCCCAGAAACGTAAGGC-3′ |
2707_HEr | 5′-gaggagaagcccggTTATTTTTTGAACAGATGTGG-3′ | |
PRU_2728 (14) | 2728_HEf | 5′-catatgAAGAAACTATTAGTAGCGTTATCG-3′ |
2728_HEr | 5′-ctcgagTTACTTAAAGAGACTCTGAGCCATCTTTTC-3′ |
Primers were designed and used for the purposes of either RT qPCR or heterologous expression and characterization.
f, forward; r, reverse.
Primers were synthesized by Integrated DNA Technologies (Coralville, IA), with restriction enzyme sites indicated by lowercase type.