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. 2011 Aug;77(16):5671–5681. doi: 10.1128/AEM.05321-11

Table 1.

Oligonucleotide primers used in this study

Targeta Primerb Sequencec
RT qPCR
    infB infBf 5′-TCAGAGCTGGCCACCATGA-3′
infBr 5′-CAGCATCCAGACGCTGGTT-3′
    atpD atpDf 5′-TGGGTATCTATCCCGCTGTTG-3′
atpDr 5′-TTGACACGCTGGGCACAAT-3′
    rpoB rpoBf 5′-GAAGACCTTGCTGAGTGGACTGA-3′
rpoBr 5′-TAGCAGGCTGGTCGAAACG-3′
    PRU_0012 12f 5′-TACTGCTATTACTCGCCATCAT-3′
12r 5′-ATCCATAAATGCACGGCA-3′
    PRU_1101 1101f 5′-ACTGATTTTTGCACTGGTGATT-3′
1101r 5′-AGTTTGCCCGATTGTTTAT-3′
    PRU_1396 1396f 5′-ACTAATTGTAGTGCTGGTGAGT-3′
1396r 5′-TGGCAAAACGTGTAACGTA-3′
    PRU_1726 1726f 5′-GACTGGATGTGACTGCCCAT-3′
1726r 5′-GGCAGCAAACGCTTGGTA-3′
    PRU_2033 2033f 5′-TGGTTCGCGCTCAGATTT-3′
2033r 5′-CCGTTAGCATCCTTCTTCAT-3′
    PRU_2212 2212f 5′-CTGATGCTGGCTATGACCAT-3′
2212r 5′-AACAATGGCTCTGCCTGA-3′
    PRU_2584 2584f 5′-AAGCCGAACTTTAGGTAAGA-3′
2584r 5′-TTCTGTCTGCAACGGTTT-3′
    PRU_2630 2630f 5′-TCCTATTATCAGCAGCATTGCT-3′
2630r 5′-CGGGCAGATAAACAGTTAGTT-3′
    PRU_2678 2678f 5′-TGTTTAACTTTGCACCCAAA-3′
2678r 5′-CCACAAATAATCAGCACGATA-3′
    PRU_2707 2707f 5′-CTACCGAACAGGTTGGCAA-3′
2707r 5′-ATCAGGAGGAAGCGTGGA-3′
    PRU_2728 2728f 5′-ACGTCCTGTAGATTATGCAGCA-3′
2728r 5′-GCAGGATCAGAGATGTTGAA-3′
Heterologous
    PRU_2212 2212_HEf 5′-catatgCAGACCGCAAAGAAGTTTACGTTGAACCTGTC-3′
2212_HEr 5′-ctcgagTTATTTGATGGCAGCCGCAATGATCTCGGCC-3′
    PRU_2678 2678_HEf 5′-catatgGAGAATTATCCCTATCGTGCTGATTATTTG-3′
2678_HEr 5′-ctcgagTTATTTTACTTGTTTTTTGAGCCATAGC-3′
    PRU_2707 2707_HEf 5′-gacgacgacaagatgGCCCAGAAACGTAAGGC-3′
2707_HEr 5′-gaggagaagcccggTTATTTTTTGAACAGATGTGG-3′
    PRU_2728 (14) 2728_HEf 5′-catatgAAGAAACTATTAGTAGCGTTATCG-3′
2728_HEr 5′-ctcgagTTACTTAAAGAGACTCTGAGCCATCTTTTC-3′
a

Primers were designed and used for the purposes of either RT qPCR or heterologous expression and characterization.

b

f, forward; r, reverse.

c

Primers were synthesized by Integrated DNA Technologies (Coralville, IA), with restriction enzyme sites indicated by lowercase type.