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. 2011 Sep;85(17):8777–8788. doi: 10.1128/JVI.02533-10

Table 1.

List of primers used in this study

Primer Sequence Purpose
GST-Pin1-F CGCGAATTCATGGCGGACGAG Cloning of Pin1 into the pGEX4T1 vector
GST-Pin1-R TCCCTCGAGTCACTCAGTGCG
Flag-Pin1-F GGAGAATTCAATGGCGGACGAG Cloning of Pin1 into the p3×Flag-CMV10 vector
Flag-Pin1-R CCGGGATCCTCACTCAGTGCG
AD-Pin1-F AAGGATCCATGGCGGACGAGGA Cloning of Pin1 into the pCMV-AD vector
AD-Pin1-R CCGAATTCTCACTCAGTGCGGAG
BD-NS4B-F GGGATCCGCCTCACAACTTCCTTAC Cloning of NS4B into the pCMV-BD vector
BD-NS4B-R GCGAATTCTTAGCATGGCGTAGAGCAG
BD-NS5A-F GGAAGCTTGTCCGGCTCGTGGCTAA Cloning of NS5A into the pCMV-BD vector
BD-NS5A-R AGTCTAGACTAGCAGCAGACGACATCC
BD-NS5B-F GCGAATTCTCAATGTCCTATACGTG Cloning of NS5B into the pCMV-BD vector
BD-NS5B-R AGTCTAGACTATCGGTTGGGGAGCA
5′NTR-F TGAGTGTCGTACAGCCTCCA Quantitative real-time PCR
5′NTR-R ACGCTACTCGGCTAGCAGTC
qPin1-F ATCAAGTCGGGAGAGGAG Quantitative real-time PCR
qPin1-R GCGTCTTCAAATGGCTTCT
qGAPDH-F CGCTCTCTGCTCCTCCTGTTC Quantitative real-time PCR
qGAPDH-R CGCCCAATACGACCAAATCCG
CypA-F GCG AAT TCA ATG GTC AAC CCC A Cloning of human cyclophilin A into the p3×Flag-CMV10 vector
CypA-R CGG GAT CCT TAT TCG AGT TGT CCA
CypB-F GCG AAT TCA CTG CTG CCG GGA CCT T Cloning of human cyclophilin B into the p3×Flag-CMV10 vector
CypB-R CGG GAT CCC TAC TCC TTG GCG ATG
Pin1-SR-F TGAGCCGCAGCTCAGGGAGAGTGTACTACTTCAAC Generation of siRNA-resistant mutant of Pin1
Pin1-SR-R GTTGAAGTAGTACACTCTCCCTGAGCTGCGGCTCA
Pin1-S16A-F GGAGAAGCGCATGGCCCGCAGCTCAGGC Generation of binding-defective mutant of Pin1
Pin1-S16A-R GCCTGAGCTGCGGGCCATGCGCTTCTCC
Pin1-C113A-F TCACAGTTCAGCGACGCCAGCTCAGCCAAGGC Generation of isomerase-inactive mutant of Pin1
Pin1-C113A-R GCCTTGGCTGAGCTGGCGTCGCTGAACTGTGA