Table 1.
Characteristics of the CP81 genomic sequence
| Parameter | Value |
|---|---|
| Genome size (bp) | 132,454 |
| Base content (% G+C) | 26.1 |
| Total no. of CDCs (ORFs) | 188 |
| Plus strand | 165 |
| Minus strand | 23 |
| % of genome coding for proteins | 94 |
| No. of start codons | |
| AUG | 184 |
| GUG | 2 |
| UUG | 2 |
| No. of Rho transcription terminators | 12 |
| No. of tRNA genes | 5 |
| No. of related gene products | 106 |
| No. of CP220/CPt10-related proteins (% identity) | 70 (47a [24–99]) |
| No. of T4-type phage-related proteins (% identity) | 29 (5a [23–51]) |
| No. of proteins related to other phages (% identity) | 15a (24–43) |
| No. of proteins related to Campylobacter/Helicobacter (% identity) | 13a (31–98) |
| No. of proteins related to other bacteria (% identity) | 21a (24–61) |
a
Number of related proteins with the best NCBI BlastP match.