Table I. Proteins that are regulated in response to glyphosate treatment in glyphosate-sensitive soybean plants.
Proteins from control PAN leaves were labeled with TMT reagents 126, 127, and 128. Glyphosate-treated PAN plants were labeled with TMT reagents 129, 130, and 131. The average control ratio is the average of the ratios 127:126, 128:127, and 126:128; se control is the se for these three ratios. The glyphosate-treated (Gly)/control ratio is the average of the ratios 129:126, 130:126, and 131:126, with the se for these three ratios.
| Protein Identifier | Protein Description | Ratio Gly/Control | se Gly/Control | Average Control | se Control | Mascot Protein Score | Matched Spectra |
| Gm0068x00308 | Stress-induced protein SAM22; AltName: starvation-associated message; AltName: allergen = Gly m 4 | 5.61 | 2.28 | 1.06 | 0.27 | 1,137 | 90 |
| Gm0101x00067 | Disease resistance-responsive protein related/dirigent protein-related | 1.90 | 0.37 | 1.06 | 0.25 | 94 | 14 |
| Gm0062x00004 | Vitamin-B12-independent Met synthase, 5-methyltetrahydropteroyltri-Glu-homo-Cys | 1.83 | 0.45 | 1.09 | 0.34 | 218 | 15 |
| Gm0253x00027 | Predicted: similar to HSC70-1 (heat shock cognate 70-kD protein1); ATP-binding isoform 1 (Vitis vinifera) | 1.67 | 0.15 | 1.04 | 0.2 | 77 | 21 |
| Gm0072x00084 | Nucleoside diphosphate kinase 1; AltName: nucleoside diphosphate kinase I; short = NDP kinase I; short = NDPK I; short = NDK I | 1.47 | 0.46 | 1.12 | 0.35 | 94 | 10 |
| Gm0009x00167 | Chloroplast Cu/Zn SOD (Gossypium arboreum) | 1.42 | 0.35 | 1.11 | 0.36 | 272 | 17 |
| Gm0097x00143 | O-Methyltransferase, putative (Ricinus communis) | 1.42 | 0.11 | 1.1 | 0.36 | 38 | 8 |
| Gm0038x00256.1 | Peroxisomal 3-ketoacyl-CoA thiolase precursor | 1.41 | 0.13 | 1.04 | 0.22 | 75 | 7 |
| Gm0041x00326 | CP12 (Pisum sativum) | 0.63 | 0.21 | 1.42 | 1.48 | 49 | 17 |
| Gm0026x00493 | 14-kD Pro-rich protein DC2.15 precursor, putative | 0.64 | 0.06 | 1.02 | 0.20 | 959 | 54 |
| Gm0467x00004 | PSI P700 apoprotein A2 (Glycine max) | 0.67 | 0.01 | 1.28 | 1.14 | 86 | 20 |
| Gm0025x00404 | Germin-like protein (Pisum sativum) | 0.70 | 0.04 | 1.00 | 0.02 | 1,234 | 51 |
| Gm0025x00719 | Extracellular Ca2+-sensing receptor (Glycine max) | 0.71 | 0.08 | 1.21 | 0.82 | 53 | 8 |
| Gm0188x00005 | Dehydroascorbate reductase (Glycine max) | 0.74 | 0.02 | 1.13 | 0.72 | 38 | 60 |
| Gm0152x00052 | FLA13 (fasciclin-like arabinogalactan protein 13 precursor; Arabidopsis thaliana) | 0.75 | 0.03 | 1.03 | 0.27 | 445 | 28 |
| Gm0262x00055 | PSII 47-kD protein (Glycine max) | 0.75 | 0.02 | 1.22 | 0.97 | 2,399 | 154 |