Table 3. Coverage of genomic features by small RNAs.
| RNA class | non-Esmeraldo (# reads) a | Esmeraldo (# reads) a | Unassigned contigs (# reads) a |
| tRNA | 280,417 (72.17%) [28,394] | 150,675 (92.65%) [20,445] | 2637 (13.26%) [564] |
| rRNA | 94,382 (24.29%) [9994] | 3412 (2.1%) [731] | 15,506 (77.95%) [3435] |
| snRNA/snoRNA | 3647 (0.94%) [1632] | 3193 (1.96%) [1263] | 235 (1.18%) [157] |
| CDS | 691 (0.18%) [393] | 3011 (1.85%) [896] | 22 (0.11%) [10] |
| mini-exon | 0 (0%) [0] | 5 (0%) [4] | 0 (0%) [0] |
| other | 9414 (2.42%) [2392] | 2326 (1.43%) [1462] | 1493 (7.51%) [744] |
| total | 388,551 (100%) [42,805] | 162,622 (100%) [24,801] | 19,893 (100%) [4910] |
a
Refers to the number of single mapping reads that align either entirely or partially. The number in brackets refers to the number of unique (non-redundant) reads.