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| Synonymous (Πs) | Non-Synonymous (Πa) | All Sites (Π) | |
| Papaver (S1, S3, S8, Sn1) | 0.70 | 0.28 | 0.36 |
| Papaver (all) | 0.57 | 0.24 | 0.30 |
| A. munita | 0.30 | 0.14 | 0.17 |
| P. californicus | 0.49 | 0.20 | 0.26 |
| R. coulteri | 0.20 | 0.11 | 0.13 |
Only sequences with 5′ ends were included except R. coulteri where only 3′ end sequences were amplified. The four known Papaver S-alleles have the greatest overall divergence for both types of sites.
