Table 4. Likelihood ratio test statistics (−2ΔlnL) compare models with selection (boldface) to preceding neutral models on 5′ end containing sequences from Papaver, Argemone and Platystemon.
a) | ||||
Model | Likelihood | −2ΔlnL | p-value (df) | Selected sites |
M1 | −6410.82 | N/A | ||
M2 | −6406.15 | 9.34 | p<0.01 (2) | 107, 119 |
M3 | −6374.01 | 73.62 | p<<0.01 (3) | None |
M7 | −6370.63 | N/A | ||
M8 | −6366.94 | 7.38 | p<0.05 (2) | 107*, 119 |
Posterior probabilities for sites under selection are ≥0.95 except when followed by an asterisk, in which case 0.90≤p≤0.95.
5′ Alignment of 10 Papaver, 11 A. munita and 11 P.calfornicus sequences (a). 5′Alignment of 11 A. munita and 11 P.californicus sequences only (b).