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. Author manuscript; available in PMC: 2012 Sep 9.
Published in final edited form as: J Mol Biol. 2011 Jul 18;412(1):22–34. doi: 10.1016/j.jmb.2011.07.007

Table 2.

Tilt and roll angles between Tg and adjacent bases

Sequence
context
Inter-base
pair
Tilt
(°)
Roll
(°)
Inter-base
pair
Tilt
(°)
Roll
(°)
5′-G-Tg-G G-Tg 14.9 −16.2 Tg-G −9.1 −3.5
5′-A-Tg-G A-Tg 60.4 −44.7 Tg-G −11.0 12.7
5′-C-Tg-G C-Tg −46.1 11.8 Tg-G 9.6 −6.7
5′-T-Tg-G T-Tg −45.6 −6.5 Tg-G 15.0 1.3
B-DNA 4.5 −2    4.5 −2   

Tilt and roll angles were calculated with Curves.31 In the 5′-A-Tg-G sequence context, Tg adopts an orientation that ismore extrahelical than in other complexes, which explains the marked difference in the angle values. The tilt and roll angles for B-DNAwere calculated and averaged from the structure of a B-form DNA dodecamer (PDB ID code: 1BNA).32