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. 2011 Aug 25;12:354. doi: 10.1186/1471-2105-12-354

Figure 1.

Figure 1

Schematic diagram of the PASHA assembly pipeline. (i) k-mer generation and distribution over a number of MPI processes; (ii) distributed preliminary de Bruijn graph construction and simplification over a number of MPI processes; (iii) Bubble merging and contig generation; and (iv) scaffolding.