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. Author manuscript; available in PMC: 2012 Nov 1.
Published in final edited form as: Gene. 2011 Jul 19;487(1):21–28. doi: 10.1016/j.gene.2011.07.004

Figure 1. IRF1 binding motif discovery.

Figure 1

A) The consensus sequence logo of the 18bp binding motif as a summarization of 107 sites defined by ChIP-seq peaks. B) The relative locations of ChIP-seq peak summits relative to the motif. C) The distribution of the 3' and 5' end bases of sequencing reads around the 107 binding peaks, using the last base of 18bp motif as the reference point. The strand-specific pattern was the result of sequencing from the 3' and 5' ends. The distance between the two peaks corresponds to the size of the IRF1 binding region.