Table 1. Percentage nucleotide identities between MCoVs and selected CoVs based on full-length genomic sequences.
Percentage nucleotide identities between MCoVs and other selected CoVs are highlighted in bold. BCoV, Bovine CoV; IBV, infectious bronchitis virus; MHV, mouse hepatitis virus; PEDV, porcine epidemic diarrhoea virus.
TGEV M6 | FIPV 79-1146 | PEDV | HCoV NL63 | HCoV 229E | MCoV WD1127 | MCoV WD1133 | HCoV OC43 | HCoV HKU1 | BCoV Mebus | MHV A59 | SARS-CoV Tor2 | IBV Beaudette | |
85.4 | 55.9 | 56.6 | 55.4 | 65.3 | 65.4 | 43.9 | 42.3 | 43.9 | 41.5 | 43.4 | 42.6 | TGEV M6 | |
55.4 | 56.4 | 55.3 | 64.7 | 65.1 | 43.7 | 42.2 | 43.7 | 41.4 | 42.9 | 42.4 | FIPV 79-1146 | ||
64.6 | 63.2 | 56.2 | 56.1 | 43.2 | 41.7 | 43.0 | 41.1 | 43.0 | 42.4 | PEDV | |||
69.5 | 57.3 | 57.3 | 45.0 | 44.6 | 45.0 | 42.3 | 43.8 | 43.7 | HCoV NL63 | ||||
56.1 | 55.8 | 43.8 | 44.9 | 43.8 | 41.5 | 43.3 | 43.4 | HCoV 229E | |||||
91.7 | 42.1 | 40.7 | 42.2 | 39.8 | 41.1 | 41.0 | MCoV WD1127 | ||||||
42.0 | 40.7 | 42.2 | 39.7 | 41.0 | 40.9 | MCoV WD1133 | |||||||
71.2 | 96.1 | 72.4 | 51.5 | 48.1 | HCoV OC43 | ||||||||
70.6 | 69.5 | 49.1 | 47.5 | HCoV HKU1 | |||||||||
73 | 51.9 | 48.3 | BCoV Mebus | ||||||||||
48.9 | 44.7 | MHV A59 | |||||||||||
48 | SARS-CoV Tor2 | ||||||||||||
IBV Beaudette |