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In Stage II, the top five SNPs based on their marginal posterior probabilities using the OpenBUGS software for three Bayesian variable selection methods including the Gibbs variable selection (GVS), the Stochastic Search Variable Selection (SSVS), the unconditional priors (UP) approach.
| Posterior Ranking | GVS | SSVS | UP |
|---|---|---|---|
| 1 | hCV7911132 | hCV7911132 | hCV7911132 |
| 2 | rs173365 | rs2070762 | rs173365 |
| 3 | rs2070762 | rs1866388 | rs2070762 |
| 4 | rs6196 | rs173365 | rs6196 |
| 5 | rs1866388 | rs6196 | rs1866388 |
