Table 5.
Portions of the virtual genome map for tammar wallaby chromosome 5 (MEU5).
| Marker (Human gene symbol) | Marker (Ensembl ID)a | Location (kb) | Confidence Levelb | Location (cM) | Location (band) |
|---|---|---|---|---|---|
| ptr | 0 | NA | 0.00 | p3 | |
| MAP3K15 | ENSMODG00000009020 | 52 | 2 | 0.04 | p3 |
| . . . * | |||||
| CXADR | ENSMODG00000020956 | 36862 | 2 | 29.53 | p2 |
| USP25 | ENSMODG00000020954 | 37113 | 1 | 29.73 | p2 |
| NRIP1 | ENSMODG00000020951 | 37474 | 1 | 30.02 | p2 |
| SAMSN1 | ENSMODG00000020950 | 37623 | 2 | 30.14 | p2 |
| . . . | |||||
| cen | 66812 | NA | 53.52 | cen | |
| ASB9 | ENSMODG00000017264 | 66989 | 1 | 53.64 | q1 |
| ASB11 | ENSMODG00000017240 | 67067 | 1 | 53.69 | q1 |
| PIGA | ENSMODG00000017236 | 67096 | 1 | 53.71 | q1 |
| FIGF | ENSMODG00000017234 | 67131 | 1 | 53.73 | q1 |
| PIR | ENSMODG00000017232 | 67233 | 1 | 53.80 | q1 |
| BMX | ENSMODG00000017228 | 67298 | 1 | 53.84 | q1 |
| ACE2 | ENSMODG00000017222 | 67358 | 1 | 53.88 | q1 |
| TMEM27 | ENSMODG00000017212 | 67469 | 1 | 53.95 | q1 |
| CA5B | ENSMODG00000017209 | 67537 | 1 | 54.00 | q1 |
| ZRSR2 | ENSMODG00000017202 | 67566 | 1 | 54.01 | q1 |
| AP1S2 | ENSMODG00000017197 | 67589 | 1 | 54.03 | q1 |
| GRPR | ENSMODG00000017191 | 68033 | 1 | 54.32 | q1 |
| S100G | ENSMODG00000017180 | 68470 | 1 | 54.61 | q1 |
| CTPS2 | ENSMODG00000017176 | 68521 | 2 | 54.64 | q1 |
| . . . | |||||
| BREAKPOINT7 | 293771 | NA | 202.37 | q3 | |
| MORN1 | ENSG00000116151 | 293771 | 0 | 202.37 | q3 |
| RER1 | ENSG00000157916 | 293824 | 0 | 202.41 | q3 |
| PEX10 | ENSG00000157911 | 293834 | 0 | 202.41 | q3 |
| PLCH2 | ENSG00000149527 | 293889 | 0 | 202.45 | q3 |
| PANK4 | ENSG00000157881 | 293913 | 0 | 202.46 | q3 |
| HES5 | ENSG00000197921 | 293928 | 0 | 202.47 | q3 |
| C1orf93 | ENSG00000157870 | 293972 | 0 | 202.50 | q3 |
| MMEL1 | ENSG00000142606 | 293975 | 0 | 202.50 | q3 |
| AL831784.17 | ENSG00000215913 | 294014 | 0 | 202.53 | q3 |
| ACTRT2 | ENSG00000169717 | 294291 | 0 | 202.71 | q3 |
| PRDM16 | ENSG00000142611 | 294327 | 0 | 202.74 | q3 |
| TPRG1L | ENSG00000158109 | 294748 | 0 | 203.01 | q3 |
| WDR8 | ENSG00000116213 | 294753 | 0 | 203.01 | q3 |
| TP73 | ENSG00000078900 | 294769 | 0 | 203.03 | q3 |
| CCDC27 | ENSG00000162592 | 294845 | 0 | 203.08 | q3 |
| LRRC47 | ENSG00000130764 | 294866 | 0 | 203.09 | q3 |
| KIAA0562 | ENSG00000116198 | 294892 | 0 | 203.11 | q3 |
| DFFB | ENSG00000169598 | 294925 | 2 | 203.13 | q3 |
| ... | |||||
| LENG8 | ENSG00000167615 | 339572 | 2 | 232.41 | q3 |
| LENG9 | ENSG00000182909 | 339581 | 0 | 232.42 | q3 |
| LAIR2 | ENSG00000167618 | 339612 | 0 | 232.44 | q3 |
| FCAR | ENSG00000186431 | 339894 | 0 | 232.62 | q3 |
| GP6 | ENSG00000088053 | 340000 | 0 | 232.68 | qtr |
| qtr | 340000 | NA | 232.68 | qtr |
Markers in bold are also shown in the integrated map (Table 4)
* "..." rows indicate where there are markers not listed in the table.
a. ENSMODG = opossum; ENSG = human
b. 2 = high: linkage and/or FISH-mapped tammar wallaby markers; 1 = medium: not mapped in the tammar wallaby but occurs in a block whose orientation could be deduced from tammar wallaby FISH-mapping data; 0 = low: neither mapped in tammar wallaby nor has any tammar wallaby evidence supporting an order.