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Average sensitivity (SN) and positive predictive value (PPV) for RNA families with pseudoknots
| Profile-csHMM | ||||||||
|---|---|---|---|---|---|---|---|---|
| M-constraint | Original | Proposed | PSTAG | |||||
| SN (%) | PPV (%) | SN (%) | PPV (%) | SN (%) | PPV (%) | SN (%) | PPV (%) | |
| Corona_pk3 | 95.5 | 95.7 | 95.7 | 96.5 | 94.8 | 96.0 | 94.6 | 95.5 |
| HDV_ribozyme | 94.5 | 95.1 | 94.5 | 95.3 | 94.2 | 95.9 | 94.1 | 95.6 |
| Tombus_3_IV | 95.9 | 96.4 | 95.9 | 96.4 | 96.8 | 97.4 | 97.4 | 97.4 |
| Flavi_pk3 | 94.6 | 96.5 | 94.5 | 96.4 | 94.5 | 96.8 | N/A | N/A |
