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. 2011 Sep 12;6(9):e24576. doi: 10.1371/journal.pone.0024576

Figure 1. Overview of the AMD algorithm.

Figure 1

AMD applies a step-wise motif discovery method, which includes core motif filtering, degeneration, extension, refinement and redundancy removal. The selected potential motifs in each step are subjected to the next step for further processing. For more details, see Methods.