Table 1.

The percentage of correct orders (PCO, %) obtained by four algorithms for eight different population sizes (PS), absence and presence of crossover interference, and two different missing genotype rates (MS, %) for 10 markers on one chromosome

Independence
PS	MS	SERa	UG	NM	IN (50)
50	0	63.50	68.55	42.80	72.00
	10	59.00	59.85	37.90	66.10
100	0	91.65	92.40	70.75	96.00
	10	87.75	90.40	62.35	94.15
150	0	99.20	99.10	87.50	99.60
	10	96.45	96.30	77.95	98.70
200	0	99.30	99.40	90.90	100.00
	10	98.70	97.80	84.50	99.00
250	0	99.90	99.70	91.70	100.00
	10	99.65	100.00	87.95	100.00
300	0	100.00	99.50	94.00	100.00
	10	99.80	99.70	89.15	99.70
350	0	100.00	100.00	94.40	100.00
	10	100.00	100.00	90.85	100.00
400	0	100.00	100.00	95.20	100.00
	10	100.00	100.00	92.00	100.00
Interference
50	0	82.90	85.00	71.75	90.35
	10	80.45	80.75	64.15	84.65
100	0	93.45	94.90	79.75	96.05
	10	88.65	90.25	73.75	90.95
150	0	92.85	93.65	84.35	94.80
	10	91.85	93.25	78.40	93.60
200	0	96.80	96.30	88.55	97.35
	10	96.40	96.05	83.25	96.85
250	0	96.75	96.30	91.60	97.20
	10	95.90	96.10	84.30	96.50
300	0	94.60	95.10	90.50	95.25
	10	95.45	94.30	87.15	96.00
350	0	95.60	94.95	91.85	96.00
	10	95.35	94.45	87.75	95.45
400	0	97.65	97.65	93.65	97.85
	10	96.20	95.75	86.40	96.50

^aSER seriation, UG unidirectional growth, NM neighbor mapping, IN (50) insertion with 50 repetitions