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. 2011 Mar 16;19(8):887–892. doi: 10.1038/ejhg.2011.44

Table 3. Evaluation in 748 MMR mutation carriers of the CRC risk associated with 8q23.3, 11q23.1, 18q21, CYP1A1 and IGF1 variants.

    Total sample (N=748) Males (N=349) Females (N=399)
Locus Genotype N CRC cases Hazard ratioa 95% CI Pb N CRC Cases HR 95% CI Pb N CRC cases HR 95% CI Pb
8q23.3 rs16892766
  AA 641 277 1     290 142 1     351 135 1    
  AC 104 50 1.184 0.866–1.617 0.2892 57 34 1.266 0.836–1.916 0.2656 47 16 1.067 0.677–1.680 0.7802
  CC 3 2 0.267 0.083–0.861 0.0271 2 1 0.460 0.301–0.701 0.0003 1 1 / / <0.0001
            0.0462         0.0002         <0.0001
  Per allele     1.032 0.778–1.368 0.8283     1.117 0.770–1.621 0.5602     0.899 0.575–1.405 0.6397
                                 
11q23.1 rs3802842
  AA 380 167 1     178 90 1     202 77 1    
  AC 321 139 0.923 0.725–1.176 0.5165 141 71 0.844 0.611–1.167 0.3047 180 68 1.019 0.723–1.438 0.9125
  CC 47 23 1.107 0.684–1.791 0.6793 30 16 1.043 0.599–1.815 0.8814 17 7 1.222 0.543–2.750 0.6284
            0.6491         0.5079         0.8891
  Per allele     0.988 0.806–1.210 0.9058     0.947 0.735–1.220 0.6740     1.052 0.778–1.422 0.7428
                                 
18q21 Novel 1
  CC 156 72 1     84 45 1     72 27 1    
  CG 395 165 0.956 0.704–1.296 0.7702 185 87 1.021 0.675–1.546 0.9215 210 78 0.865 0.546–1.370 0.5359
  GG 197 92 1.006 0.727–1.390 0.9729 80 45 1.088 0.706–1.677 0.7007 117 47 0.903 0.564–1.447 0.6714
            0.9001         0.9087         0.8249
  Per allele     1.007 0.859–1.181 0.9326     1.044 0.841–1.295 0.6962     0.964 0.765–1.215 0.7570
                                 
CYP1A1 rs1048943
  AA 708 313 1     331 168 1     377 145 1    
  AG 40 16 1.026 0.601–1.752 0.9249 18 9 0.930 0.444–1.948 0.8480 22 7 1.168 0.583–2.338 0.6619
  GG 0 0 / / / 0 0 / / / 0 0 / / /
            0.9249         0.8480         0.6619
  Per allele     1.026 0.601–1.752 0.9249     0.930 0.444–1.948 0.8480          
                                 
CYP1A1 rs4646903
  TT 598 265 1     279 143 1     319 122 1    
  TC 140 61 1.031 0.769–1.382 0.8400 66 32 0.909 0.601–1.375 0.6524 74 29 1.198 0.789–1.818 0.3956
  CC 10 3 1.163 0.387–3.495 0.7882 4 2 3.496 1.517–8.057 0.0033 6 1 0.507 0.071–3.640 0.4997
            0.9441         0.0090         0.5434
  Per allele     1.039 0.801–1.347 0.7730     1.001 0.680–1.474 0.9948     1.079 0.746–1.561 0.6874
                                 
IGF1 CA repeat
   ≥18;≥18 710   1     329   1     381   1    
   ≥18; ≤17 38   0.731 0.447–1.196 0.2127 20   0.662 0.372–1.179 0.1611 18   0.979 0.450–2.132 0.9579
a

Hazard ratio relative to subjects not carrying the SNP on either allele for each of the five SNPs considered or to subjects with CA repeat length greater than or equal to 18 on both alleles for the IGF1 promoter and obtained from Cox proportional hazard regression stratified on gender (if applicable), mutated MMR gene (MSH2, MLH1, MSH6) and year of birth (<1940, 1940–1949, 1950–1959, 1960–1969, 1970–1979 and ≥1980), and with control for familial aggregation. The per-allele value refers to Cox regression with a trend fitted for number of alleles carrying the SNP (0, 1, 2).

b

For each of the five SNP variants and each sample (total sample, males, females), the first two P-values refer to separate comparisons of heterozygous and homozygous subjects for the SNPs considered, with subject not presenting the SNP on either allele; the third P-value refers to the overall comparison of heterozygous, homozygous and SNP-free subjects (heterogeneity test); the final P-value refers to the assessment of the trend for the number of alleles carrying the SNP (0, 1, 2). For IGF1 CA repeat length, the P-value refers to the comparison of subjects with CA repeat length less than or equal to 17 on one allele to subjects with CA repeat length greater than or equal to 18 on both alleles. All tests are Wald tests.