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. 2011 Mar 16;19(8):887–892. doi: 10.1038/ejhg.2011.44

Table 4. Evaluation in 329 MMR mutation carriers with CRC of the risk associated with 8q23.3, 11q23.1, 18q21, CYP1A1 and IGF1 variants.

    Total sample (N=329) Males (N=177) Females (N=152)
Locus Genotype N Hazard ratioa 95% CI Pb N HR 95% CI Pb N HR 95% CI Pb
8q23.3 rs16892766
  AA 277 1     142 1     135 1    
  AC 50 0.793 0.559–1.124 0.1920 34 0.768 0.478–1.234 0.2749 16 0.833 0.5041.376 0.4759
  CC 2 / / <0.0001 1 / / <0.0001 1 / / <0.0001
          <0.0001       <0.0001       <0.0001
  Per allele   0.666 0.481–0.922 0.0144   0.647 0.414–1.009 0.0549   0.698 0.443–0.102 0.1227
                           
11q23.1 rs3802842
  AA 167 1     90 1     77 1    
  AC 139 0.941 0.738–1.199 0.6216 71 0.840 0.593–1.191 0.3274 68 1.067 0.751–1.515 0.7180
  CC 23 1.234 0.694–2.195 0.4736 16 1.034 0.548–1.950 0.9182 7 1.815 0.664–4.963 0.2457
          0.6151       0.5740       0.5057
  Per allele   1.028 0.831–1.272 0.9763   0.947 0.723–1.239 0.947   1.170 0.854–1.604 0.3289
                           
18q21 Novel 1
  CC 72 1     45 1     27 1    
  CG 165 0.828 0.588–1.166 0.2804 87 1.081 0.701–1.667 0.7249 78 0.571 0.315–1.035 0.0647
  GG 95 0.741 0.516–1.062 0.1029 45 0.867 0.554–1.358 0.5326 47 0.570 0.305–1.068 0.0793
          0.2637       0.5573       0.1637
  Per allele   0.865 0.726–1.031 0.1056   0.919 0.735–1.149 0.4607   0.796 0.595–1.065 0.1238
                           
CYP1A1 rs1048943
  AA 313 1     168 1     145 1    
  AG 16 1.107 0.609–2.011 0.7387 9 1.105 0.502–2.432 0.8045 7 1.110 0.447–2.754 0.8224
  GG 0 / / / 0 / / / 0 / / /
          0.7387       0.8045       0.8224
  Per allele   1.107 0.609–2.011 0.7387   1.105 0.502–2.432 0.8045   1.110 0.447–2.754 0.8224
                           
CYP1A1 rs4646903
  TT 265 1     143 1     122 1    
  TC 61 0.988 0.725–1.348 0.9412 32 1.070 0.696–1.647 0.7568 29 0.902 0.572–1.421 0.6558
  CC 3 1.741 0.925–3.278 0.0856 2 2.276 0.890–5.822 0.0861 1 1.241 0.759–2.029 0.3895
          0.2094       0.2291       0.5036
  Per allele   1.038 0.786–1.372 0.7919   1.139 0.773–1.678 0.5117   0.930 0.618–1.399 0.7277
                           
IGF1 CA repeat
   ≥18;≥18 314 1     166 1     148 1    
   ≥18; ≤17 15 0.710 0.397–1.272 0.2502 11 0.562 0.297–1.063 0.0765 4 1.709 0.470–6.212 0.4160
a

Hazard ratio relative to subjects not carrying the SNP on either allele for each of the five SNPs considered or to subjects with CA repeat length greater than or equal to 18 on both alleles for the IGF1 promoter and obtained from Cox proportional hazard regression stratified on gender (if applicable), mutated MMR gene (MSH2, MLH1, MSH6) and year of birth (<1940, 1940–1949, 1950–1959, 1960–1969, 1970–1979 and ≥1980), and with control for familial aggregation. The per-allele value refers to Cox regression with a trend fitted for number of alleles carrying the SNP (0, 1, 2).

b

For each of the five SNP variants and each sample (total sample, males, females), the first two P-values refer to separate comparisons of heterozygous and homozygous subjects for the SNPs considered, with subject not presenting the SNP on either allele; the third P-value refers to the overall comparison of heterozygous, homozygous and SNP-free subjects (heterogeneity test); the final P-value refers to the assessment of the trend for the number of alleles carrying the SNP (0, 1, 2). For IGF1 CA repeat length, the P-value refers to the comparison of subjects with CA repeat length less than or equal to 17 on one allele to subjects with CA repeat length greater than or equal to 18 on both alleles. All tests are Wald tests.