TABLE 1.
MS/MS analysis of recombinant pro-NGF treated with tryptase
Shown is a list of peptides identified with precursor mass accuracies <5 ppm and Mascot ion scores >25. Arrows indicate tryptase cleavage sites. Start and stop positions refer to the sequence of the recombinant pro-NGF. M(ox), oxidized methionine.
Ion score | Delta mass | Start | Stop | |
---|---|---|---|---|
ppm | ||||
-↓MEPHSESNVPA↓G | 30 | 1.73 | 1 | 11 |
-↓MEPHSESNVPAG↓H | 32 | 0.46 | 1 | 12 |
-↓MEPHSESNVPAGH↓T | 61 | 1.21 | 1 | 13 |
-↓M(ox)EPHSESNVPAGH↓T | 65 | 1.25 | 1 | 13 |
H↓TIPQVHWTK↓L | 27 | −0.73 | 14 | 22 |
K↓LQHSLDT↓A | 50 | 1.59 | 23 | 29 |
K↓LQHSLDTALR↓R | 60 | −0.01 | 23 | 32 |
K↓LQHSLDTALRR↓A | 28 | 0.46 | 23 | 33 |
Q↓HSLDTALR↓R | 36 | −0.35 | 25 | 32 |
H↓SLDTALR↓R | 49 | 0.74 | 26 | 32 |
L↓DTALR↓R | 34 | 0.26 | 28 | 32 |
R↓ARSAPAAAIAAR↓V | 48 | 0.76 | 34 | 45 |
A↓RSAPAAAIAAR↓V | 57 | 0.91 | 35 | 45 |
R↓SAPAAAIAAR↓V | 85 | 0.07 | 36 | 45 |
S↓APAAAIAAR↓V | 48 | −1.16 | 37 | 45 |
A↓PAAAIAAR↓V | 61 | 1.57 | 38 | 45 |
A↓AIAAR↓V | 28 | 1.29 | 41 | 45 |
T↓RNITVDPR↓L | 31 | 1.13 | 51 | 58 |
R↓NITVDPR↓L | 40 | 0.83 | 52 | 58 |
R↓NITVDPRLFK↓K | 41 | 0.97 | 52 | 61 |
N↓ITVDPR↓L | 29 | 0.82 | 53 | 58 |
R↓SPRVLF↓S | 27 | 1.21 | 67 | 72 |
P↓RVLFSTQPPR↓E | 35 | 2.22 | 69 | 78 |
R↓VLFSTQPPR↓E | 72 | −1.17 | 70 | 78 |
F↓EVGGAAPFNR↓T | 37 | 0.26 | 89 | 98 |
R↓SSSHPIFHR↓G | 28 | 0.45 | 105 | 113 |
K↓ALTMDGKQAAWR↓F | 50 | 2.66 | 192 | 203 |