Qo site reactions and ranges of their rate constants allowed in different modeling trials
Numbering of reactions corresponds to Fig. 5. Ranges of published rate constants for bacterial complex III were taken from Ref. 32 and expanded to include mammalian values (35). In trial 1, values were constrained to the indicated ranges and k5 = k7 = 1650 s−1. In trial 2, k5 and k7 were allowed to vary independently over the range indicated. Trial 3 and trial 4 allowed k5 and k7 to vary and also assumed that the rate constants of reaction 6 were defined by a function of the reduction state of cytochrome b562: k6 = (b562%redk6red + (100 − b562%red)k6ox)/100 and k−6 similarly. n/a, not applicable because the Riesk Fe-S center in reactions 5 and 7 was assumed to reoxidize instantly, and reaction 9 was considered to be essentially irreversible.