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. 2011 Jul 27;286(37):32344–32354. doi: 10.1074/jbc.M111.249003

TABLE 1.

Identification of differentially expressed proteins between the miNeg HEK293 cells and miCUL4B HEK293 cells

Spot no. Protein description Mr/pI Matched peptides Coverage (%) NCBI accession No. Mascot score
A. Up-regulated proteins in miCUL4B HEK293 cells
1 Triose-phosphate isomerase 1 26700/6.45 7/20 25 4507645 72
2 Eukaryotic translation initiation factor 3, subunit 2β 36606/5.38 7/33 44 4503513 83
4 Superoxide dismutase 1, soluble 15941/5.70 6/36 85 4507149 151
5 Peroxiredoxin III 25854/6.00 6/17 29 32483377 272
8 Cyclin H 37779/6.73 5/17 21 4502623 63
11 Non-metastatic cells 1, protein (NM23A) expressed in isoform b 17217/5.83 9/27 31 4557797 84
13 Glyoxalase I 20818/5.24 11/31 26 5729842 75
14 Tropomyosin 3 isoform 2 29127/4.75 7/65 33 24119203 96
19 Proteasome α1 subunit isoform 2 29665/6.15 9/35 51 4506179 59
20 Heat shock 70-kDa protein 9B precursor 73922/5.87 31/62 40 24234688 332
30 Heat shock 27-kDa protein 3 16987/5.66 3/27 30 53688 57
31 Aspartyl-tRNA synthetase 57340/6.11 3/6 22 45439306 82
32 NADH dehydrogenase (ubiquinone)1β subcomplex 12082/5.47 2/19 30 4758778 61
33 2B28 protein 35229/5.32 5/18 29 21361517 173

B. Down-regulated proteins in miCUL4B HEK293 cells
3 Eukaryotic translation initiation factor 5A 16917/5.08 4/28 47 4503545 174
16 Heat shock 70-kDa protein 5 (glucose-regulated protein, 78 kDa) 72464/5.07 16/48 40 16507237 173
18 Tripartite motif-containing 47 69600/6.03 6/15 15 54792146 57
25 ATP binding protein associated with cell differentiation 26581/5.61 4/24 19 18104959 75
26 Annexin A5 36042/4.94 11/21 51 4502107 278
28 Sulfotransferase family, member 1 33239/5.42 16/59 49 7657633 67
29 Heterogeneous nuclear ribonucleoprotein K isoform b 51136/5.39 14/37 19 14165435 79