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. Author manuscript; available in PMC: 2012 Sep 1.
Published in final edited form as: Virus Res. 2011 Jun 29;160(1-2):206–213. doi: 10.1016/j.virusres.2011.06.021

Figure 3.

Figure 3

Phylogenetic relationships of K13965 and CSIRO-1342 with representative rhabdoviruses derived from partial L (156 aa; A), N (325 aa; B) and full L amino acid sequence (970 aa; C). The geographic origin (*Africa, # Australia) is indicated for K13965, CSIRO-1342 and members of the Sandjimba and Almpiwar groups. K13965 is indicated by a circled arrowhead. Analysis was performed using a Bayesian method applying a WAG model of amino acid replacement with a gamma distribution of rate variation among sites for 10 million generations (with a 25% burn-in). Support for each node is provided by BPP (Bayesian posterior probability) (>0.8). Branch lengths are drawn to scale and the trees were mid-point rooted. Amino acid sequences used were: ABLV, Australian bat lyssavirus (L:NP_478343; N:AAD01267); ALMV, Almpiwar virus (L:AY854645); ARAV, Aravan virus (L:ABV03822; N:Q6X1D8); ARV, Adelaide River virus (L:AF234534; N:AAC54627); BBOV, Bimbo virus (L:GU816016); BEFV, bovine ephemeral fever virus (L:NP_065409; N:NP_065398); BGNV, Bangoran virus (L:GU816010); BRMV, Berrimah virus (L:AAZ43265); BTKV, Boteke virus (L:GU816014); BYSMV, barley yellow striate mosaic virus (L:ACT21686); CFRV, China fish rhabdovirus (L:AAX86686); CHPV, Chandipura virus (L:P13179; N:P11211); CHVV9824, Charleville virus (L:AY854644); CHVV9847, Charleville virus (L:AY854672); COCV, Cocal virus (L:ACB47438; N:ACB47434); CPV, coastal plains virus (L:ADG86364; N:ADG86356); DAffSV, Drosophila affinis sigma virus 10 (L:GQ410980); DobsSV, Drosophila obscura sigma virus 10A (N:GQ410979); DURV, Durham virus (L:ADB88761; N:ADB88758); DUVV, Duvenhage virus (L:ABZ81216; N:Q66453); EBLV1, european bat lyssavirus 1 (L:ABZ81181; N:AAX62875); EBLV2, european bat lyssavirus 2 (L:ABZ81191; N:YP_001285393); FLAV, Flanders virus (L:AAN73288; N:AAN73283); FUKV, Fukuoka virus (L:AAZ43279); GARV, Garba virus (L:GU816018); HDOOV, Humpty doo virus (L:AAZ43271); HIRRV, Hirame rhabdovirus (L:NP_919035; N:NP_919030); IHNV, infectious hematopoietic necrosis virus (L:CAA52076; N:NP042676); IRKV, Irkut virus (L:ABV03823; N:Q5VKP6); ISFV, Isfahan virus (L:Q5K2K3; N:Q5K2K7); KAMV, Kamese virus (L:GU816011); KCV, Kern Canyon virus (N:ABE69215); KEUV, Keuraliba virus (L:GU816021); KHUV, Khujand virus (L:ABV03824; N:Q6X1D4); KIMV, Kimberley virus (L:AAZ43266); KOLV, Kolongo virus (L:GU816020; N:ABE69214); KOTV, Kotonkan virus (L:AAZ43267; N:ABE69213); LBV, Lagos bat virus (L:ABZ81171; N:ABF56214); LDV, Le Dantec virus (L:AAZ43278); LYMoV, lettuce yellow mottle virus (L:YP_002308376; N:YP_00208371); LNYV, lettuce necrotic yellows virus (L:YP_425092; N:CAG34083); MEBV, mount Elgon bat virus (N:ABE69217); MFSV, maize fine streak virus (L:YP_052849; N:YP_052843); MMV, maize mosaic virus (L:YP_052855; N:YP_052850); MOKV, Mokola virus (L:ABZ81211; N:YP_142350); MOSV, Mossuril virus (L:GU816012); MOUV, Moussa virus (L:ACZ81402; N:ACZ81403); NASV, Nasoule virus (L:GU816017); NCMV, northern cereal mosaic virus (L:NP_597914; N:NP_057954); NGAV, Ngaingan virus (L:YP_003518294; N:YP_003518280); NKOV, Nkolbisson virus (L:GU816022); OBOV, Obodhiang virus (N:ABE69212); OFV, orchid fleck virus (L:YP_001294929; N:BAH97109); OITAV, Oita rhabdovirus (N:BAD13431); OUAV, Ouango virus (L:GU816015); PCRV, Parry Creek virus (L:AAZ43275); PERV, Perinet virus (L:AAZ43280); PFRV, Pike fry rhabdovirus (L:ACP28002; N:ACP27998); PIRYV, Piry virus (N:P26037); PORV, Porton virus (L:GU816013); PYDV, potato yellow dwarf virus (N:ABW35154); RABV, Rabies virus (L:Q66T60; N:ACN15666); RBUV, Rochambeau virus (N:ABE69218); RYSV, rice yellow stunt virus (L:NP_620502; N:NP_620496); SCRV, Siniperca chuatsi rhabdovirus (L:YP_802942; N:YP_802937); SCV, strawberry crinkle virus (L:AAP03645); SFRV, Starry flounder rhabdovirus (L:AY450644); SHRV, snakehead rhabdovirus (L:NP_050585; N:NP_050580); SIGMAV, Drosophila melanogaster sigma virus (N:ACV67011); SIGMAVHAP23, Drosophila melanogaster sigma virus HAP23 (L:GQ375258; N:GQ375258); SIGMAVHAP30, Drosophila melanogaster sigma virus AP30 (L:YP_003126913; N:YP_003126908); SJAV, Sandjimba virus (L:GU816019; N:ABE69216); STRV, sea trout rhabdovirus (N:AAL35756); SVCV, spring viraemia of carp virus (L:Q91DR9; N:ABW24033); SYNV, Sonchus yellow net virus (L:NP_042286; N:NP_042281); TaVCV, Taro vein chlorosis virus (L:YP_224083; N:YP_224078); TIBV, Tibrogargan virus (L:ADG86355; N:ADG86347); TUPV, Tupaia virus (L:YP_238534; N:YP_238528); VHSV, viral hemorrhagic septicemia virus (L:CAB40833; N:P24378); VSAV, vesicular stomatitis Alagoas virus (L:ACB47443; N:ACB47439); VSIV, vesicular stomatitis Indiana virus (L:NP_041716; N:P11212); VSNJV, vesicular stomatitis New Jersey virus (L:P16379; N:P04881); WCBV, West Caucasian bat virus (L:ABV03821; N:Q5VKP2); WOGV, Wongabel virus (L:AAZ43276; N:YP_002333271).