Table 1.
Gene | Primer symbol | Primer sequence (5'-3') | Tm (℃) |
Used for |
---|---|---|---|---|
MMP19 | MMP19.L | ACAGGGTCCGTATGAGGCA | 65 | cDNA cloning |
MMP19 | MMP19.R | GGAAATCCGAGGCTCAACG | ||
MMP19 | 5'RACE.MMP19.R | GGTTCAAGATGCGGAAGGTCAGGTGC | ||
MMP19 | 3'RACE.MMP19.L | CCACGCCGTTGGATGGGGATACTTC | ||
MMP19 | 3'RACE nest | TCTCCACCACCCACTCATTC | ||
MMP23B | MMP23B-CDS.L | GACGCCGCTACACGCTGACC | 65 | cDNA cloning |
MMP23B | MMP23B-CDS.R | CGCGGACCCCCCAGGAGTA | ||
MMP23B | MIB2.3003 | GCTACCGGCAGATGGAGGAACGC | ||
MMP23B | MMP23B.258 | GGTCAGCGTGTAGCGGCGTCTTC | ||
MMP23B | 3'RACE.MMP23B.R | TACCCCGTCAACCACACCGACTGCC | ||
MMP23B | 3'RACE nest | GACTTCTGCTACGAGTTCCC | ||
MMP19 | 19.116 | GGCTTCCTACTCCCCATGAC | 60 | Intron 1Intron 2 |
MMP19 | 19.336 | CTCATACGGACCCTTGTGGC | ||
MMP19 | 19.311 | GATGATGCCACAAGGGTCCG | 58 | Intron 3 |
MMP19 | 19.601 | GTTATTGGAGCAGTATGGGC | ||
MMP19 | 19.501 | GTGGCTCCCTTGACTTTCCG | 56 | Intron 4 |
MMP19 | 19.775 | CTGGGTGTATCGGGAGTG | ||
MMP19 | 19.715 | CATCATTGCAGCCCACGAAC | 59 | Intron 5,6,7 |
MMP19 | 19.1085 | CTTCCCAAAGGGCAGACAC | ||
MMP19 | 19.1031 | ACCGTGACAGATTCAGGGC | 59 | Intron 8 |
MMP19 | 19.2114 | AATCCGAGGCTCAACGACG | ||
MMP19 | 19map1 | TGCTCAACGGCACCCTAC | 58 | mapping |
MMP19 | 19map2 | AGGAAGGCGGTCAGAGTC | ||
MMP23B | 23map1 | CAAAGAGCGGCACCGAAAGC | 60 | |
MMP23B | 23map2 | GTGGTCCCAACGTAGCCTG | ||
MMP19 | MMP19V1-F | TCGGACACAATGGATTCACTTC | expression analyses | |
MMP19 | MMP19V1-R | GCCCGGAGACATCTTGAAATT | ||
MMP19 | MMP19V1-P | FAM-CGTAGCGCCACACCTTGTCTCCCT-TAMRA | ||
MMP23B | MMP23B-F | TCGCAGGACGAGCTGTGG | ||
MMP23B | MMP23B-R | GCGTCACAGAAGCCCCTC | ||
MMP23B | MMP23B-P | FAM-CACACGAACAGCCGGTCCAGG-TAMRA | ||
β-actin | ATCB-F | TCCAGAGGCGCTCTTCCA | ||
β-actin | ATCB-R | CGCACTTCATGATCGAGTTGA | ||
β-actin | ATCB-P | FAM-CCTCCTTCCTGGGCATGGAGTCCT-TAMRA | ||
MMP19 | 19mor3023:exon 5 | ACTCTGACCGCCTTCCTC | 60 | SNP genotyping |
MMP19 | 19mor3367:exon 5 | TCAAGCCCGAAGAGGTGC | ||
MMP23B | 23mor2.1:exon 3 | AGAGCGGCACCGAAAGCG | 60 | |
MMP23B | 23mor2.2:exon 3 | CTGCTTGACCCCAGACCC | ||
MMP23B | 23mor260:exon 4 | CGGCGGCATCCACTTTGACG | 60 | |
MMP23B | 23mor2.2:exon 4 | CTGCTTGACCCCAGACCC |