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. 2011 Sep 16;6(9):e24543. doi: 10.1371/journal.pone.0024543

Table 3. Loci sequenced and P. andina isolates cloned.

Locus Lengtha Pa isolates cloned Primers Ta b
ypt1 (IR) 227 EC 3399, EC 3561, EC 3563, EC 3818, EC 3821, EC 3189 IRF – TTGCAGCACAACCCAAGACG; IRR – TGCACGTACTATTCGGGGTTC 61C
ypt1 (RAS) 544 EC 3163, EC 3399, EC 3563, EC 3821 RASF – CGTGTCTGCTTCTCCGTTTCG; RASR – CCAGGCTTTCGGCAAATTCC 61C
ypt1 (IRRAS) 987 EC 3163, EC 3510, EC 3563, EC 3655, EC 3818, POX 102 IRF – TTGCAGCACAACCCAAGACG; RASR – CCAGGCTTTCGGCAAATTCC 61C
trp1 814 EC 3818, POX 102 F3 – GGGTAACATCCTGGAGGAGA; R3 - TCGTACTTGACCACGTCTGC 63C
beta-tubulin 1592 EC 3836, POX 102 F1 – GTCCGAATTCTCCTCAGAGC; F2 – CGCTATCGGTACACCAGCTT; F3b – ACCATAACGAAGGGAAAGG; R1 – GATGCCAAGCCACTAACCTC; R2 – CCTCATTGTCCAGGCACAT 58C
PITG11126 788 EC 3163, EC 3510, POX 102 F1 – GGGGACTTCGCTGTTTGTTA; R1 – ATGTTCATGTACGGCTGACG 59C
a

Length of the multiple sequence alignment across all sequenced isolates.

b

Optimal annealing temperature of primers for PCR based on experience in the Grünwald lab.