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. 2011 Sep 21;101(6):1440–1449. doi: 10.1016/j.bpj.2011.07.048

Figure 4.

Figure 4

Main active site residue contacts with the substrates or cofactors during the GK OGMP, ATP simulation (see Tables 1–3). Hydrogen atoms are hidden for clarity. Catalytic residue annotations are shaded according to their domain (CORE, GMP-BD, and LID). GMP, ATP, and magnesium are represented as in Fig. 2. The HyperBalls representation was used to highlight magnesium coordination (d ≤ 2.9 Å) (44). (Top left) A channel is shown that could enable water access to the binding site in order to complete the catalytic reaction.