Table 3.
YSL family members identified in maize
| Gene name | BAC clone | EST | AGI cDNA Clone | ZmYS1 similarity |
|---|---|---|---|---|
| ZmYSL1 | ZMMBBc236J17 | Yes | ZM_BFc0116O09 | Positives = 542/679 (79 %) |
| ZmYSL2 | ZMMBBb0160K05 | Yes | NFL | |
| ZmYSL3 | ZMMBBc0188N03 | Yes | ZM_BFc0183J03 | Positives = 580/683 (84 %) |
| ZmYSL5 | ZMMBBc0304K02 | No | NFL | |
| ZmYSL6 | ZMMBBb0104J01 | Yes | ZM_BFc0173F20 | Positives = 395/545 (72 %) |
| ZmYSL10 | ZMMBBc0253M12 | No | NFL | |
| ZmYSL11 | ZMMBBc0253M12 | Yes | ZM_BFb0369O22 | Positives = 472/687 (68 %) |
| ZmYSL11A | ZMMBBc0387I20 | Yes | ZM_BFb0216K02 | Positives = 394/599 (65 %) |
| ZmYSL12 | ZMMBBc0253M12 | Yes | ZM_Bfb0208H07 | Positives = 479/680 (70 %) |
| ZmYSL13 | ZMMBBb0399B15 | Yes | NFL | |
| ZmYSL14 | ZMMBBc0381P05 | Yes | NFL | |
| ZmYSL14A | ZMMBBc0559K13 | Yes | ZM_BFc0143N23 | Positives = 474/695 (68 %) |
| ZmYSL17 | ZMMBBc0116H02 | Yes | ZM_BFb0095P17 | Positives = 393/687 (57 %) |
| ZmYSL18 | ZMMBBc0169J03 | Yes | NFL | |
| Pseudogene A | ZMMBBc0104G21 | Unclear | NFL | |
| Pseudogene B | ZMMBBc0116C01 | Yes | NFL | |
| Pseudogene C | ZMMBBc0130M13 | No | NFL | |
| Pseudogene D | ZMMBBc0217D07 | Yes | NFL |
Maize YSL cDNA clones sequenced in this study are listed, along with amino acid sequence similarity to maize YS1.
NFL, no full-length cDNA clone available.