. Author manuscript; available in PMC: 2013 Jan 1.

Published in final edited form as: Comp Biochem Physiol C Toxicol Pharmacol. 2011 Apr 3;155(1):102–108. doi: 10.1016/j.cbpc.2011.03.012

Table 1.

Deep sequencing and mapping of two Xiphophorus fishes and their F₁ hybrid using RNA-Seq

Fish type	Total # of reads	# of mapped reads^a	% of mapped reads	Reads coverage^b
X. maculatus Jp 163 B	26,156,645	4,816,169	18.41	3.78
X. couchianus	31,204,498	4,586,358	14.70	3.60
F₁ hybrid	28,335,078	4,348,411	15.35	3.45

reads are mapped to the reference transcriptome of X. maculatus Jp 163 A

average number of reads per base in the reference transcriptome. Total size of transcriptome is 63.6 Mb.