Table 2. Number of variable sites, transitions, transversions, synonymous and nonsynonymous differences, and pa/ps ratio.
| Region/ Gene | No. of variable sites | Transitions | Transversions | Synonymous | Nonsynonymous | pa/ps |
|---|---|---|---|---|---|---|
| Control region | 192 | 157 | 35 | NA | NA | NA |
| Other noncoding | 8 | 6 | 2 | NA | NA | NA |
| 12S rRNA | 23 | 22 | 1 | NA | NA | NA |
| 16S rRNA | 44 | 35 | 9 | NA | NA | NA |
| tRNAs | 39 | 38 | 1 | NA | NA | NA |
| ATP6 | 41 | 40 | 1 | 16 | 25 | 0.756 |
| ATP8 | 14 | 14 | 0 | 6 | 8 | 0.570 |
| COX1 | 66 | 63 | 3 | 56 | 10 | 0.079 |
| COX2 | 32 | 31 | 1 | 24 | 8 | 0.145 |
| COX3 | 39 | 35 | 4 | 26 | 13 | 0.218 |
| CYTB | 66 | 61 | 5 | 46 | 20 | 0.193 |
| ND1 | 44 | 41 | 3 | 31 | 13 | 0.198 |
| ND2 | 46 | 42 | 4 | 30 | 16 | 0.241 |
| ND3 | 15 | 15 | 0 | 11 | 4 | 0.174 |
| ND4L | 11 | 9 | 2 | 8 | 3 | 0.184 |
| ND4 | 60 | 59 | 1 | 49 | 11 | 0.103 |
| ND5 | 87 | 81 | 6 | 57 | 30 | 0.236 |
| ND6 | 28 | 27 | 1 | 25 | 3 | 0.045 |
| Total | 855 | 776 | 79 | 385 | 164 |