Skip to main content
. 2011 May 25;19(9):935–941. doi: 10.1038/ejhg.2011.80

Table 2. Classification of mutations.

Varianta Mutationa Severity groupc SIFTd Exon Type, location Functional effecte Allele frequencies
p.G591D c.1772G>A Moderate 0.42 5 Missense, Cu 6 Extensive mislocalization 1% (1/70)
p.R616Q c.1847G>A Moderate 0.07 5 Missense   1% (1/70
Ex5-6delb c.1708-?_1946+?del Severe 5–6 Deletion, Cu 6   1% (1/70)
p.D642H c.1924G>C Moderate 0.05 6 Missense, Cu6/TM1   3% (2/70)
p.I669I-fs c.2007_2013delATATGCT Moderate 7 Deletion, TM1   6% (4/70)
p.M769H-fs c.2304insC Severe 8 Insertion, TM4   1% (1/70)
p.M769V c.2305A>G Moderate 0.52 8 Missense, TM4 Normal rescue ΔCcc2 yeast. Normal cellular localization 3% (2/70)
p.R778 L c.2333G>T Severe 0.01 8 Missense, TM4 Reduced rescue ΔCcc2 yeast. Extensive mislocalization 3% (2/70)
p.W779X c.2336G>A Severe 0.00 8 Non-sense, TM4   12% (8/70)
p.G943D c.2828G>A Severe 0.02 12 Missense, TM5   4% (3/70)
p.T977M c.2930C>T Severe 0.00 13 Missense, TM6 No rescue ΔCcc2 yeast 1% (1/70)
p.A1003T c.3007G>A Moderate 0.00 13 Missense, TM6   1% (1/70)
p.I1021 Kb c.3062T>A Severe 0.00 14 Missense, ATP   3% (2/70)
p.R1041W c.3121C>T Moderate 0.03 14 Missense, ATP loop, N-domain   3% (2/70)
p.H1069Q c.3207C>A Severe 0.00 14 Missense, ATP loop, N-domain No/reduced rescue ΔCcc2 yeast. Extensive mislocalization 18% (12/70)
p.G1158Vb c.3473G>T Moderate 0.03 16 Missense, ATP loop, N-domain   1% (1/70)
p.M1169T c.3506T>C Moderate 0.01 16 Missense, ATP loop, N-domain   3% (2/70)
p.T1220M c.3659C>T Severe 0.00 17 Missense, ATP binding P-domain   6% (4/70)
p.G1266R c.3796G>A Severe 0.00 18 Missense, ATP hinge, P-domain   6% (4/70)
p.N1270S c.3620A>G Severe 0.00 18 Missense, ATP hinge, P-domain Reduced ATP hydrolysis activity 3% (2/70)
p.P1273 L c.3818C>T Severe 0.00 18 Missense, ATP hinge, P-domain   3% (3/70)
p.L1304Fb c.3912G>T Severe 0.00 19 Missense, between ATP hinge and TM7   3% (2/70)
p.G1341D c.4022G>A Severe 0.02 20 Missense, TM7   1% (1/70)
p.Q1351X c.4051C>T Moderate 0.00 20 Non-sense, loop between TM7-TM8   1% (1/70)
p.S1363F c.4088C>T Severe 0.00 20 Missense, TM 8   6% (4/70)
IVS20-2A>Gb c.4022-2A>G Moderate Intron 20 Splice-site, skipping of exon 21   1% (1/70)
Ex20-21del c.4022-?_4398+?del Severe 20-21 TM8, C-ter   3% (2/70)
a

Nucleotide numbering refers to the cDNA numbering, where +1 is the A of the ATG translation initiation codon in the reference sequence. Codon 1 is the initiation codon, ATG.

b

New mutations in bold letters, reported for the first time in this study.

c

Severe, age of onset<20 years; moderate, age of onset>20 years.

d

SIFT: predicts whether a substitution can be tolerated or not: >0.05 tolerated; <0.05 affect protein function.

e

Reviewed in de Bie et al.36