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. Author manuscript; available in PMC: 2012 Sep 29.
Published in final edited form as: J Phys Chem B. 2011 Aug 31;115(38):11215–11229. doi: 10.1021/jp203695t

Table 2.

NOE derived distances from NMR experiments and mean Proton-Proton distances from HREX simulations calculated as a <r-6>-1/6 average for all model glycopeptide systems (compounds 1 to 14). Sampling of the proton-proton distances exhibiting bimodal distribution from HREX simulations.

Comp Experiment HREX d(HN,HNT) d(Hα,HNT)

d1a d2a d3a d1a d2a d3a <3.6Å >3.6Å <2.9Å >2.9Å

1 2.9 40 2.3 40 2.9 40 2.28 2.78 2.73 81.9% 18.1% 26.4% 73.6%
2 2.841 2.441 2.941 2.51 2.69 2.88 71.3% 28.7% 30.3% 69.7%
3 2.941 2.241 2.641 2.67 2.46 2.70 45.6% 54.4% 61.3% 38.7%
4 3.041 2.341 2.841 2.66 2.52 2.86 50.5% 49.5% 49.7% 50.3%
5 2.743 2.343 2.643 2.54 2.45 2.74 44.0% 56.0% 60.7% 39.3%
6 2.343 2.543 2.843 2.53 2.7 2.82 69.1% 30.9% 29.6% 70.4%
7 3.042 2.342 2.742 2.58 2.44 2.55 48.1% 51.9% 69.1% 30.9%
8 2.842 -- -- 2.45 2.84 2.87 82.0% 18.0% 18.4% 81.6%
9 2.47 2.49 2.72 55.0% 45.0% 53.0% 47.0%
10 2.39 3.02 2.88 91.0% 9.0% 9.9% 90.1%
11 2.89 2.37 2.71 26.4% 73.6% 79.1% 20.9%
12 2.53 2.67 2.83 67.0% 33.0% 31.5% 68.5%
13 2.64 2.4 2.76 36.5% 63.5% 69.1% 30.9%
14 2.61 2.57 2.86 56.7% 43.3% 43.6% 56.4%

d1 - d(HN,HNT), d2 - d(Hα,HNT), d3 - d(Hα,HN),

a

Distances are given in angstroms.