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. 2011 Sep 7;8:426. doi: 10.1186/1743-422X-8-426

Table 1.

Amino acid sequence of the predicted VP1 protein CD8+ T cell epitopes and BIMAS scores

MHC-restriction Code Start Position Subsequence Residue Listing Score
H-2Ld pL1 103 NPTAYHKGPF 300
pL2 117 LPYTAPHRVL 150
pL3 89 VPNGAPETAL 150
pL4 9 DPVTTTVENY 72
pL5 121 APHRVLATVY 60
pL6 110 GPFTRLALPY 60
pL7 45 QSPTHVIDLM 37.5
pL8 42 IPSQSPTHVI 30
pL9 158 LPASFNFGAI 30
pL10 188 RPLLAVKVTS 30
H-2Dd pD1 138 TGNAGRRGDL 30
pD2 109 KGPFTRLALP 24
pD3 141 AGRRGDLGS 3
pD4 62 VGALLRAATY 10
pD5 45 QSPTHVIDLM 7.2
pD6 41 KIPSQSPTHV 7.2
pD7 33 GFIMDRFVKI 6
pD8 116 ALPYTAPHRV 6
pD9 56 THQHGLVGAL 3
pD10 197 SQDRHKQRII 20
H-2Kd pK1 106 AYHKGPFTRL 3456
pK2 33 FIMDRFVKI 1920
pK3 163 NFGAIRATVI 1152
pK4 71 YYFSDLEIVV 720
pK5 70 TYYFSDLEIV 600
pK6 184 LYCPTPLLAV 600
pK7 204 RIIAPAKQLL 115.2
pK8 52 DLMQTHQHGL 80
pK9 77 EIVVRHDDNL 80
pK10 175 LLVRVKRAEL 80