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. 2011 Sep 27;6(9):e25619. doi: 10.1371/journal.pone.0025619

Table 3. Sites under positive selection in partetratvirus ORF1 and ORF2.

Sequence Codon position SLAC FEL REL
dN-dS p-value dN-dS p-value dN-dS Bayes factor
ORF1 675 2.993 0.308 0.548 0.071 −0.569 1.0
ORF2 115 3.079 0.416 0.441 0.073 −0.007 90.274
208 2.399 0.436 0.310 0.081 0.129 359.477
209 1.482 0.670 0.193 0.206 0.039 93.682
214 2.730 0.296 0.311 0.145 −0.059 63.585
216 1.820 0.444 0.190 0.140 0.138 215.139
217 3.576 0.212 0.471 0.085 −0.065 61.723
226 1.820 0.444 0.206 0.129 0.142 251.557
250 1.820 0.444 0.197 0.239 −0.076 50.127
344 2.758 0.321 0.342 0.117 0.057 134.893
356 1.826 0.453 0.219 0.207 0.036 93.512
358 2.691 0.309 0.335 0.137 −0.075 58.670
382 5.907 0.099 1.453 0.015 −0.168 38.311
384 5.251 0.183 1.420 0.023 −0.402 14.133

A p-value of <0.1 is considered to be statistically significant for positive selection analysis by SLAC and FEL. A Bayes factor of >50 is considered statistically significant for positive selection by REL.