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. 2011 Oct;179(4):2108–2119. doi: 10.1016/j.ajpath.2011.06.017

Table 2.

Primer Sequence and Annealing Temperature for PCR Analysis, with Literature Citations

Exon Forward primer Reverse primer Annealing temperature, °C
Exon 124 5′-ATTTCCATCCTGCAGAAGAAGC-3′ 5′-CATCCGTCTACTCCCACGTTCT-3′ 55
Exon 224 5′-AGTTTGATTGCTGCATATTTCAGA-3′ 5′-TCTTTTTCTGTGGCTTAGAAATCTTTT-3′ 55
Exon 324 5′-ATGGTATTTGAGATTAGGAA-3′ 5′-TGGACTTCTTGACTTAATCGGTTT-3′ 55
Nested exon 4, Outer24 5′-GTTAAACACAGCATAATATGTGTCACATT-3′ 5′-TTAAAGATAATTCTTAAAT-3′ 51
Nested exon 4, Inner24 5′-AAAGATTCAGGCAATGTTTGTTAGT-3′ 5′-TGTATCTCACTCGATAATCTGGATG-3′ 51
Alternate exon 451 5′-CATTATAAAGATTCAGGCAATG-3′ 5′-GACAGTAAGATACAGTCTATC-3′ 58
Exon 524 5′-ATCCAGTGTTTCTTTTAAATA-3′ 5′-ATCTGTTTTCCAATAAATTCT-3′ 55
Exon 624 5′-CTAATGTATATATGTTCTTAA-3′ 5′-CTTCTAGATATGGTTAAGAAA-3′ 50
Exon 724 5′-GTATATTGCTGATATTAATCATT-3′ 5′-ATTATAGTTCCTTACATGTCA-3′ 55
Exon 824 5′-TTTTGGGTAAATACATTCTT-3′ 5′-CGCACCTTTGCCCCAGAT-3′ 55
Alternate exon 851 5′-TGTCATTTCATTTCTTTTTCTTTTC-3′ 5′-AAGTCAACAACCCCCACAAA-3′ 56
Exon 924 5′-TGTTGAACATCTTAAGAAGA-3′ 5′-ATGACACAGCTACACAACCTT-3′ 55
RT-PCR52 5′-CGAACTGGTGTAATGATATGT-3′ 5′-CATGAACTTGTCTTCCCGT-3′ 60