Table 1.
List of primers used in the qPCR validation assays
| Gene | Forward sequence | Reverse sequence | Amplicon size bp |
|---|---|---|---|
| GAPDH | CAAACCGTTGGTGACAGTATTTG | GCACTGAGCATAAGGACACATCTAA | 69 |
| RHO_57 | ATCCCTTTCCTCTCAGGAAAAAA | TCAAGTCAGCCCACTACAGAGTTG | 95 |
| RHO 60 | CCCCGAGGGCATGCA | TGTAAGTGGCGAACATGTAGATGA | 95 |
| USP-like | TGACTCACAGCGCCACATG | TGAGAGAAGCCAAAAAAAGC | 71 |
| Tr_22897 | TGCGCTGGAACGAAGATG | GCCCTGAGGTCCGAAGCT | 60 |
| PLA2G12B | TCTCTCCTCAGCATGTGAAACG | AGGGTCTGCAGCCCAGAGT | 71 |
| GLUT1 | GTCATGTAACCCTGATGAAAAGGA | CGCGCCGCAGACTTTCT | 60 |
| C2 | AGGTGCTCACTGCGCTTACA | AAGTGCAACCGCTGTGCAT | 70 |
| CXCR1 | CCCTGAGCACTGCTTTGTTTT | GGTTGACGCAGCTGTGGAA | 60 |
| KCNK12 | CCACGGTCGCCCACAT | ACAATCTGCGGCCCTCAGTA | 67 |
| PCYT1B | CCTCCGTCCCTGAGCAGAA | TGGCGTAGGACAGCATTCG | 64 |
GADPH (glyceraldehyde 3-phosphate dehydrogenase): reference gene used for normalization of the qPCR results. Target genes were RHO_57 (rhodopsin transcript variant ENSGACT-00000003757), RHO_60 (rhodopsin transcript variant ENSGACT00000003760), USP-like (ubiquitin specific protease-like), Tr_22897 (transcript ‘ENSGACT00000022897’), PLA2G12B (phospholipase 2 group XIIB), GLUT1 (glucose transporter 1), C2 (complement precursor), CXCR1 (interleukin-8 receptor alpha), KCNK12 (potassium channel), and PCYT1B (phosphate cytidylyltransferase 1, choline, beta).