Table 3.

Associations with nonsynonymous polymorphisms. Shown is the gene with the location of the polymorphism.

Phenotype	Gene (snp)	Polymorphism	r²
Mated-30	CG9820	Lys31Asn^*	0.08
Remated	CG9820	Glu113Lys^**	0.11
	CG9897	Arg76Ser^**, ^a	0.15
	CG9897	Gly83Asp^**, ^a	0.14
	CG9897	Ile88Asn^***	0.19
	CG9897	Ala89Ser^**	0.16
	CG10363	Asp1491Glu^*	0.08
	CG11797	Ala32Val^***	0.17
	CG11797	Lys33Stop^**, ^a	0.09
Fertility-V1	CG9897	Gly83Asp^**	0.10
	CG10363	Leu955Pro^**	0.11
Fertility	CG11797	Thr15Ala^*	0.09

^***

experimentwise P< 0.05,

^**

markerwise P < 0.005,

markerwise P < 0.01

no longer significant (P < 0.05) after inclusion of linked markers into ANOVA.