Figure 5. Enriched GO biological processes of genes with low expression and an upstream peak.

This figure shows the significant biological process GO annotations for genes with low gene expression and a MACS peak upstream. The top line in each of the boxes lists the GO identifier of the term and the statistical significance (multiple hypothesis corrected p-value, lower is more significant) of that annotation. The middle lines are a description of the GO term. The four numbers on the bottom line are the number of genes with low expression and an upstream peak that had the annotation, the number of genes with low expression and an upstream peak that had any annotation (always 247), the total number of genes that had the annotation and the total number of genes that had any annotation (always 30241). The color of the box is an indication of the significance of the term. White boxes are not significant. The higher level it is, the more significant the GO term is. The color of the arrows indicates the relationship among the GO terms. Black signifies “is_a.” Orange is “part_of;” red is “positive_regulate.” Purple is “regulate,” while green is “negative_regulate.” Long dashes indicate “two significant nodes,” and short dashes mean “one significant node.”