Table 2.
Tissue-specific expression of abiotic stress related QTLs of rice
| Locus ID | QTLsa | Tissue | Number of EST | Frequency |
|---|---|---|---|---|
| LOC_Os01g46610 | AQCS001 (UV-b light sensitivity), AQCS004 (UV-b light sensitivity), CQI2 (sodium uptake), CQI3 (sodium to potassium content ratio) | Anther | 7 | 0.039 |
| LOC_Os03g46770 | AQCS002 (UV-b light sensitivity), AQCS005 (UV-b light sensitivity), AQD002 (UV-b light sensitivity), AQD010 (leaf rolling), AQD022 (leaf drying), AQD028 (leaf drying), AQR013 (deep root dry weight), CQAW10 (penetrated root number) | Endosperm | 22 | 0.339 |
| LOC_Os12g36830 | AQCl012 (phosphorus sensitivity), AQD026 (leaf drying), AQDZ005 (lodging incidence), AQGl019 (root dry weight), AQGL025 (root dry weight), AQGl026 (root dry weight), AQGl066 (root dry weight), AQGl092 (root dry weight), AQGl098 (root dry weight) | Flower | 101 | 0.169 |
| LOC_Os05g33570 | DQE50 (relative water content), DQC9 (penetrated root number), AQC016 (penetrated to total root ratio), DQC16 (penetrated to total root ratio) | Immature seed | 11 | 0.278 |
| LOC_Os02g38480 | CQAA16 (relative phosphorus distribution between shoot and root), CQAA17 (relative phosphorus distribution between shoot and root), | Root tip | 1 | 1.235 |
| LOC_Os11g47760 | AQAR001 (root dry weight), AQF105 (potassium chlorate resistance) | Seed | 46 | 0.137 |
| LOC_Os02g38920 | CQAA16 (relative phosphorus distribution between shoot and root), CQAA17 (relative phosphorus distribution between shoot and root) | Seedling | 14 | 0.281 |
| LOC_Os06g50300 | AQGI059 (root dry weight), AQGI060 (root dry weight), AQEK004 (iron sensitivity), AQEK006 (iron sensitivity), AQEK008 (iron sensitivity), AQEK012 (iron sensitivity) | Sheath | 2 | 0.575 |
| LOC_Os11g06720 | AQAL058 (rooting depth), AQEX028 (root dry weight), AQF104 (potassium chlorate resistance) | Shoot | 387 | 0.232 |
| LOC_Os11g06720 | AQAL058 (rooting depth), AQEX028 (root dry weight), AQF104 (potassium chlorate resistance) | Stem | 11 | 0.474 |
| LOC_Os08g10020 | CQAW4 (penetrated root number), CQl1 (potassium concentration) | Whole plant | 135 | 0.221 |
aIndicate the traits related to abiotic stress.