Table 1. Primer sequences and conditions for amplification of VSX2 exons.
Set/exon | Forward primer sequence | Reverse primer sequence | PCR product | Annealing temp/ special conditions |
---|---|---|---|---|
Set 1/exon 1 |
TCCAGAGCATTAGACACCGG |
TGGCAGGAACTTTTCCGCCT |
603 bp |
55 °C (5% DMSO; 20% Betaine) |
Set 2/exon 2 |
GTTCAAAACCTCCGGATTCG |
TCCGTTGTCGGCGAAAATAG |
392 bp |
55 °C |
Set 3/exon 3 |
TCTTGTCTGAGACAGGCTCT |
TCATGGGCATCTGGAACCCT |
268 bp |
55 °C (5% DMSO; 20% Betaine) |
Set 4/exon 4 |
CACCATGGAGTAGGCGAGCT |
ATTTCTCTCCTGCTAGGCTG |
432 bp |
55 °C |
Set 5/exon 5 | CAGTTCAAGATGGCTTTCCC | ATGTCTCAGCATGGTCCAGA | 574 bp | 55 °C |