Table 5.
MEAP quantification of transcripts for genes ANO1, PPFIA1, ORAOV1 and NEO1
| Transcript | EnsemblID | GeneName | 11q13+ | 11q13− | Fold change |
|---|---|---|---|---|---|
| ANO1-201 | ENST00000316296 | ANO1 | 92.347 | 48.840 | 1.891 |
| ANO1-202 | ENST00000355303 | ANO1 | 188.707 | 67.696 | 2.788 |
| ANO1-203 | ENST00000398543 | ANO1 | 321.795 | 115.520 | 2.786 |
| PPFIA1-201 | ENST00000253925 | PPFIA1 | 629.473 | 209.528 | 3.004 |
| PPFIA1-202 | ENST00000389547 | PPFIA1 | 19.522 | 12.159 | 1.606 |
| ORAOV1-201 | ENST00000279147 | ORAOV1 | 91.076 | 23.687 | 3.845 |
| ORAOV1-202 | ENST00000376587 | ORAOV1 | 16.268 | 15.649 | 1.040 |
| ORAOV1-203 | ENST00000441922 | ORAOV1 | 62.813 | 23.884 | 2.630 |
| NEO1-001 | ENST00000261908 | NEO1 | 38.639 | 16.000 | 2.415 |
| NEO1-201 | ENST00000339362 | NEO1 | 4.780 | 1.456 | 3.283 |
| NEO1-202 | ENST00000379842 | NEO1 | 46.656 | 18.975 | 2.459 |
In our HNSCC dataset, there are 7 samples in 11q13+ and 8 samples in 11q13− group. Median is applied to represent the expression of each transcript in 11q13+ or 11q13− group. Expression and fold changes in this table are on linear-scale.