Table 3.
SNP analysis of the distribution of Pasteuria 16S rRNA gene sequences between all combinations of Pasteuria tested
| Combination | SNP distribution analysisa |
|||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| V1 | V2 | V3 | V4 | V5 | V6 | V7 | V8 | V9 | Other | |
| P. penetrans vs P. penetrans | 5 (29.4) | 7 (41.2) | 1 (5.9) | 0 | 0 | 0 | 0 | 0 | 0 | 4 (23.5): 1 between V2 and V3; 2 between V2 and V3; 1 between V4 and V5 |
| P. penetrans vs P. hartismeri | 5 (10.9) | 9 (19.6) | 1 (2.2) | 5 (10.9) | 0 | 6 (13) | 1 (2.2) | 6 (13) | 2 (4.3) | 11 (23.9): 3 between V1 and V2; 6 between V2 and V3; 2 between V3 and V4 |
| P. penetrans vs P. ramosa | 10 (7.6) | 12 (9.2) | 7 (5.3) | 13 (9.9) | 1 (0.8) | 26 (19.8) | 4 (3.1) | 7 (5.3) | 8 (6.1) | 43 (32.8): 8 between V1 and V2; 20 between V2 and V3; 7 between V3 and V4; 3 between V4 and V5; 2 between V5 and V6; 3 between V7 and V8 |
| P. ramosa vs P. hartismeri | 9 (7.4) | 9 (7.4) | 6 (5) | 11 (9.1) | 1 (0.8) | 23 (19) | 4 (3.3) | 10 (8.3) | 6 (5) | 42 (34.7): 8 between V1 and V2; 19 between V2 and V3; 7 between V3 and V4; 3 between V4 and V5; 2 between V5 and V6; 3 between V7 and V8 |
a
The V codes refer to the variable regions of this gene, and the numbers of SNPs in each region are recorded along with their percent contribution (in parentheses) to the total number of SNPs between each combination of Pasteuria.